diff --git a/docs/options.md b/docs/options.md
index 5681bc0..f304c88 100644
--- a/docs/options.md
+++ b/docs/options.md
@@ -785,6 +785,7 @@ Automatically beautify Clojure files on save
 | `beautify_on_save` | :white_check_mark: | :white_check_mark: |
 | `brace_style` | :white_check_mark: | :x: |
 | `break_chained_methods` | :white_check_mark: | :x: |
+| `end_of_line` | :white_check_mark: | :x: |
 | `end_with_comma` | :white_check_mark: | :x: |
 | `end_with_newline` | :white_check_mark: | :x: |
 | `eval_code` | :white_check_mark: | :x: |
@@ -914,6 +915,34 @@ Break chained method calls across subsequent lines (Supported by Coffee Formatte
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`Coffee Formatter`](#coffee-formatter) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by Coffee Formatter)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [End with comma](#end-with-comma) 
 
 **Namespace**: `js`
@@ -2198,6 +2227,7 @@ Path to uncrustify config file. i.e. uncrustify.cfg (Supported by Uncrustify)
 | `beautify_on_save` | :white_check_mark: | :white_check_mark: |
 | `brace_style` | :white_check_mark: | :x: |
 | `break_chained_methods` | :white_check_mark: | :white_check_mark: |
+| `end_of_line` | :white_check_mark: | :x: |
 | `end_with_comma` | :white_check_mark: | :white_check_mark: |
 | `end_with_newline` | :white_check_mark: | :x: |
 | `eval_code` | :white_check_mark: | :x: |
@@ -2333,6 +2363,34 @@ Break chained method calls across subsequent lines (Supported by JS Beautify, Pr
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`JS Beautify`](#js-beautify) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by JS Beautify)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [End with comma](#end-with-comma) 
 
 **Namespace**: `js`
@@ -5297,6 +5355,34 @@ Break chained method calls across subsequent lines (Supported by JS Beautify, Pr
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`JS Beautify`](#js-beautify) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by JS Beautify)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [End with comma](#end-with-comma) 
 
 **Namespace**: `js`
@@ -5726,6 +5812,7 @@ Wrap lines at next opportunity after N characters (Supported by JS Beautify, Pre
 | `beautify_on_save` | :white_check_mark: | :white_check_mark: |
 | `brace_style` | :white_check_mark: | :x: |
 | `break_chained_methods` | :white_check_mark: | :white_check_mark: |
+| `end_of_line` | :white_check_mark: | :x: |
 | `end_with_comma` | :white_check_mark: | :white_check_mark: |
 | `end_with_newline` | :white_check_mark: | :x: |
 | `eval_code` | :white_check_mark: | :x: |
@@ -5855,6 +5942,34 @@ Break chained method calls across subsequent lines (Supported by JS Beautify, Pr
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`JS Beautify`](#js-beautify) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by JS Beautify)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [End with comma](#end-with-comma) 
 
 **Namespace**: `js`
@@ -6284,6 +6399,7 @@ Wrap lines at next opportunity after N characters (Supported by JS Beautify, Pre
 | `beautify_on_save` | :white_check_mark: | :white_check_mark: |
 | `brace_style` | :white_check_mark: | :x: |
 | `break_chained_methods` | :white_check_mark: | :white_check_mark: |
+| `end_of_line` | :white_check_mark: | :x: |
 | `e4x` | :white_check_mark: | :x: |
 | `end_with_comma` | :white_check_mark: | :white_check_mark: |
 | `end_with_newline` | :white_check_mark: | :x: |
@@ -6414,6 +6530,18 @@ Break chained method calls across subsequent lines (Supported by JS Beautify, Pr
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
 #####  [E4x](#e4x) 
 
 **Namespace**: `jsx`
@@ -6428,13 +6556,16 @@ Break chained method calls across subsequent lines (Supported by JS Beautify, Pr
 
 **Description**:
 
+Override EOL from line-ending-selector (Supported by JS Beautify)
+
 Support e4x/jsx syntax (Supported by JS Beautify)
 
 **Example `.jsbeautifyrc` Configuration**
 
 ```json
 {
-    "jsx": {
+    "js": {
+        "end_of_line": "System Default"
         "e4x": true
     }
 }
@@ -12237,6 +12368,7 @@ Maximum characters per line (0 disables) (Supported by Pretty Diff)
 | `beautify_on_save` | :white_check_mark: |
 | `brace_style` | :white_check_mark: |
 | `break_chained_methods` | :white_check_mark: |
+| `end_of_line` | :white_check_mark: |
 | `end_with_comma` | :white_check_mark: |
 | `end_with_newline` | :white_check_mark: |
 | `eval_code` | :white_check_mark: |
@@ -12366,6 +12498,34 @@ Break chained method calls across subsequent lines (Supported by TypeScript Form
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`TypeScript Formatter`](#typescript-formatter) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by TypeScript Formatter)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [End with comma](#end-with-comma) 
 
 **Namespace**: `js`
@@ -13243,6 +13403,7 @@ Maximum characters per line (0 disables) (Supported by Pretty Diff)
 | `beautify_on_save` | :white_check_mark: |
 | `brace_style` | :white_check_mark: |
 | `break_chained_methods` | :white_check_mark: |
+| `end_of_line` | :white_check_mark: |
 | `end_with_comma` | :white_check_mark: |
 | `end_with_newline` | :white_check_mark: |
 | `eval_code` | :white_check_mark: |
@@ -13378,6 +13539,34 @@ Break chained method calls across subsequent lines (Supported by Vue Beautifier)
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`Vue Beautifier`](#vue-beautifier) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by Vue Beautifier)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [End with comma](#end-with-comma) 
 
 **Namespace**: `js`
@@ -15235,6 +15424,34 @@ If a terminating comma should be inserted into arrays, object literals, and dest
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`Coffee Formatter`](#coffee-formatter) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by Coffee Formatter)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 
 ### Fortran Beautifier
 
@@ -15895,6 +16112,34 @@ If a terminating comma should be inserted into arrays, object literals, and dest
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`JS Beautify`](#js-beautify) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by JS Beautify)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [Indent inner html](#indent-inner-html) 
 
 **Namespace**: `html`
@@ -18134,6 +18379,34 @@ If a terminating comma should be inserted into arrays, object literals, and dest
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`TypeScript Formatter`](#typescript-formatter) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by TypeScript Formatter)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 
 ### Uncrustify
 
@@ -18636,6 +18909,34 @@ If a terminating comma should be inserted into arrays, object literals, and dest
 }
 ```
 
+#####  [End of line](#end-of-line) 
+
+**Namespace**: `js`
+
+**Key**: `end_of_line`
+
+**Default**: `System Default`
+
+**Type**: `string`
+
+**Enum**:  `CRLF`  `LF`  `System Default` 
+
+**Supported Beautifiers**:  [`Vue Beautifier`](#vue-beautifier) 
+
+**Description**:
+
+Override EOL from line-ending-selector (Supported by Vue Beautifier)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "js": {
+        "end_of_line": "System Default"
+    }
+}
+```
+
 #####  [Indent inner html](#indent-inner-html) 
 
 **Namespace**: `html`
diff --git a/src/beautifiers/beautifier.coffee b/src/beautifiers/beautifier.coffee
index 40ba3ef..5d326a3 100644
--- a/src/beautifiers/beautifier.coffee
+++ b/src/beautifiers/beautifier.coffee
@@ -102,6 +102,28 @@ module.exports = class Beautifier
       startDir.pop()
     return null
 
+# Retrieves the default line ending based upon the Atom configuration
+  #  `line-ending-selector.defaultLineEnding`. If the Atom configuration
+  #  indicates "OS Default", the `process.platform` is queried, returning
+  #  CRLF for Windows systems and LF for all other systems.
+  # Code modified from atom/line-ending-selector
+  # returns: The correct line-ending character sequence based upon the Atom
+  #  configuration, or `null` if the Atom line ending configuration was not
+  #  recognized.
+  # see: https://github.com/atom/line-ending-selector/blob/master/lib/main.js
+  getDefaultLineEnding: (crlf,lf,optionEol) ->
+    if (!optionEol || optionEol == 'System Default')
+      optionEol = atom.config.get('line-ending-selector.defaultLineEnding')
+    switch optionEol
+      when 'LF'
+        return lf
+      when 'CRLF'
+        return crlf
+      when 'OS Default'
+        return if process.platform is 'win32' then crlf else lf
+      else
+        return lf
+
   ###
   If platform is Windows
   ###
diff --git a/src/beautifiers/js-beautify.coffee b/src/beautifiers/js-beautify.coffee
index 902a86f..6a178e5 100644
--- a/src/beautifiers/js-beautify.coffee
+++ b/src/beautifiers/js-beautify.coffee
@@ -27,9 +27,7 @@ module.exports = class JSBeautify extends Beautifier
   beautify: (text, language, options) ->
     @verbose("JS Beautify language #{language}")
     @info("JS Beautify Options: #{JSON.stringify(options, null, 4)}")
-    #TODO reconsider handling of EOL once js-beautify adds EOL detection
-    #see https://github.com/beautify-web/js-beautify/issues/899
-    options.eol = getDefaultLineEnding() ? options.eol #fixes issue #707
+    options.eol = @getDefaultLineEnding('\r\n','\n',options.end_of_line)
     return new @Promise((resolve, reject) =>
       try
         switch language
@@ -60,23 +58,3 @@ module.exports = class JSBeautify extends Beautifier
         reject(err)
 
     )
-
-  # Retrieves the default line ending based upon the Atom configuration
-  #  `line-ending-selector.defaultLineEnding`. If the Atom configuration
-  #  indicates "OS Default", the `process.platform` is queried, returning
-  #  CRLF for Windows systems and LF for all other systems.
-  # Code modified from atom/line-ending-selector
-  # returns: The correct line-ending character sequence based upon the Atom
-  #  configuration, or `null` if the Atom line ending configuration was not
-  #  recognized.
-  # see: https://github.com/atom/line-ending-selector/blob/master/lib/main.js
-  getDefaultLineEnding= ->
-    switch atom.config.get('line-ending-selector.defaultLineEnding')
-      when 'LF'
-        return '\n'
-      when 'CRLF'
-        return '\r\n'
-      when 'OS Default'
-        return if process.platform is 'win32' then '\r\n' else '\n'
-      else
-        return null
diff --git a/src/beautifiers/prettydiff.coffee b/src/beautifiers/prettydiff.coffee
index 9881acb..ace7be2 100644
--- a/src/beautifiers/prettydiff.coffee
+++ b/src/beautifiers/prettydiff.coffee
@@ -71,7 +71,7 @@ module.exports = class PrettyDiff extends Beautifier
   }
 
   beautify: (text, language, options) ->
-
+    options.crlf = @getDefaultLineEnding(true,false,options.end_of_line)
     return new @Promise((resolve, reject) =>
       prettydiff = require("prettydiff")
       _ = require('lodash')
diff --git a/src/languages/javascript.coffee b/src/languages/javascript.coffee
index 49c7a34..a8b2e7b 100644
--- a/src/languages/javascript.coffee
+++ b/src/languages/javascript.coffee
@@ -28,7 +28,6 @@ module.exports = {
   defaultBeautifier: "JS Beautify"
 
   ###
-
   ###
   options:
     # JavaScript
@@ -111,5 +110,10 @@ module.exports = {
       default: false
       description: "If a terminating comma should be inserted into \
                   arrays, object literals, and destructured objects."
+    end_of_line:
+      type: 'string'
+      default: "System Default"
+      enum: ["CRLF","LF","System Default"]
+      description: "Override EOL from line-ending-selector"
 
 }