deleting r-beautifier folder, changing name of r-beautifier.r to formatR.r, changing name to formatR in index.coffee, generating docs.

README.md

@@ -94,7 +94,7 @@ See [all supported options in the documentation at  `docs/options.md`](https://g
 | PHP | `PHP` |`.php`, `.module`, `.inc` | [`PHP-CS-Fixer`](http://php.net/manual/en/install.php) (Default), [`PHPCBF`](http://php.net/manual/en/install.php) |
 | Puppet | `Puppet` |`.pp` | [`puppet-lint`](http://puppet-lint.com/) (Default) |
 | Python | `Python` |`.py` | [`autopep8`](https://github.com/hhatto/autopep8) (Default), [`yapf`](https://github.com/google/yapf) |
-| R | `R` |`.r`, `.R` | [`R beautifier`](https://github.com/yihui/formatR) (Default) |
+| R | `R` |`.r`, `.R` | [`formatR`](https://github.com/yihui/formatR) (Default) |
 | Riot.js | `Riot.js`, `HTML (Riot Tag)` |`.tag` | [`Pretty Diff`](https://github.com/prettydiff/prettydiff) (Default) |
 | Ruby | `Ruby`, `Ruby on Rails` |`.rb` | [`Rubocop`](https://github.com/bbatsov/rubocop) (Default), [`Ruby Beautify`](https://github.com/erniebrodeur/ruby-beautify) |
 | Rust | `Rust` |`.rs`, `.rlib` | [`rustfmt`](https://github.com/nrc/rustfmt) (Default) |

docs/options.md

@@ -8242,6 +8242,102 @@ sort imports (requires isort installed) (Supported by autopep8)
 }
 ```
 
+####  [R](#r) 
+
+**Supported Beautifiers**:  [`formatR`](#formatr) 
+
+| Option | formatR |
+| --- | --- |
+| `disabled` | :white_check_mark: |
+| `default_beautifier` | :white_check_mark: |
+| `beautify_on_save` | :white_check_mark: |
+| `indent_size` | :white_check_mark: |
+
+**Description**:
+
+Options for language R
+
+#####  [Disable Beautifying Language](#disable-beautifying-language) 
+
+**Important**: This option is only configurable from within Atom Beautify's setting panel.
+
+**Type**: `boolean`
+
+**Description**:
+
+Disable R Beautification
+
+**How to Configure**
+
+1. You can open the [Settings View](https://github.com/atom/settings-view) by navigating to
+*Edit > Preferences (Linux)*, *Atom > Preferences (OS X)*, or *File > Preferences (Windows)*.
+2. Go into *Packages* and search for "*Atom Beautify*" package.
+3. Find the option "*Disable Beautifying Language*" and change it to your desired configuration.
+
+#####  [Default Beautifier](#default-beautifier) 
+
+**Important**: This option is only configurable from within Atom Beautify's setting panel.
+
+**Default**: `formatR`
+
+**Type**: `string`
+
+**Enum**:  `formatR` 
+
+**Description**:
+
+Default Beautifier to be used for R
+
+**How to Configure**
+
+1. You can open the [Settings View](https://github.com/atom/settings-view) by navigating to
+*Edit > Preferences (Linux)*, *Atom > Preferences (OS X)*, or *File > Preferences (Windows)*.
+2. Go into *Packages* and search for "*Atom Beautify*" package.
+3. Find the option "*Default Beautifier*" and change it to your desired configuration.
+
+#####  [Beautify On Save](#beautify-on-save) 
+
+**Important**: This option is only configurable from within Atom Beautify's setting panel.
+
+**Type**: `boolean`
+
+**Description**:
+
+Automatically beautify R files on save
+
+**How to Configure**
+
+1. You can open the [Settings View](https://github.com/atom/settings-view) by navigating to
+*Edit > Preferences (Linux)*, *Atom > Preferences (OS X)*, or *File > Preferences (Windows)*.
+2. Go into *Packages* and search for "*Atom Beautify*" package.
+3. Find the option "*Beautify On Save*" and change it to your desired configuration.
+
+#####  [Indent size](#indent-size) 
+
+**Namespace**: `r`
+
+**Key**: `indent_size`
+
+**Default**: `4`
+
+**Type**: `integer`
+
+**Supported Beautifiers**:  [`formatR`](#formatr) 
+
+**Description**:
+
+Indentation size/length (Supported by formatR)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "r": {
+        "indent_size": 4
+    }
+}
+```
+
 ####  [Riot.js](#riot.js) 
 
 **Supported Beautifiers**:  [`Pretty Diff`](#pretty-diff) 
@@ -16338,6 +16434,35 @@ Indentation uses tabs, overrides `Indent Size` and `Indent Char` (Supported by C
 ```
 
 
+### formatR
+
+#####  [Indent size](#indent-size) 
+
+**Namespace**: `r`
+
+**Key**: `indent_size`
+
+**Default**: `4`
+
+**Type**: `integer`
+
+**Supported Beautifiers**:  [`formatR`](#formatr) 
+
+**Description**:
+
+Indentation size/length (Supported by formatR)
+
+**Example `.jsbeautifyrc` Configuration**
+
+```json
+{
+    "r": {
+        "indent_size": 4
+    }
+}
+```
+
+
 ### rustfmt
 
 #####  [Rustfmt path](#rustfmt-path) 

package.json

@@ -270,7 +270,8 @@
     "r beautifier",
     "vue",
     "vue beautifier",
-    "sassconvert"
+    "sassconvert",
+    "formatr"
   ],
   "devDependencies": {
     "coffeelint": "^1.10.1",
@@ -283,4 +284,4 @@
     "lint": "coffeelint src/ spec/",
     "code-docs": "codo && open docs/code/index.html"
   }
-}
+}

src/beautifiers/formatR/index.coffee

@@ -7,7 +7,7 @@ path = require("path")
 Beautifier = require('../beautifier')
 
 module.exports = class R extends Beautifier
-  name: "R beautifier"
+  name: "formatR"
   link: "https://github.com/yihui/formatR"
 
   options: {
@@ -15,7 +15,7 @@ module.exports = class R extends Beautifier
   }
 
   beautify: (text, language, options) ->
-    r_beautifier = path.resolve(__dirname, "r-beautifier.r")
+    r_beautifier = path.resolve(__dirname, "formatR.r")
     @run("Rscript", [
       r_beautifier,
       options.indent_size,

src/beautifiers/r-beautifier/index.coffee

@@ -1,25 +0,0 @@
-###
-Requires [formatR](https://github.com/yihui/formatR)
-###
-path = require("path")
-
-"use strict"
-Beautifier = require('../beautifier')
-
-module.exports = class R extends Beautifier
-  name: "formatR"
-  link: "https://github.com/yihui/formatR"
-
-  options: {
-    R: true
-  }
-
-  beautify: (text, language, options) ->
-    r_beautifier = path.resolve(__dirname, "r-beautifier.r")
-    @run("Rscript", [
-      r_beautifier,
-      options.indent_size,
-      @tempFile("input", text),
-      '>',
-      @tempFile("input", text)
-      ])