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fixing test suite.

This commit is contained in:
Jason Kulatunga 2023-10-16 21:49:15 -07:00
parent 8861e4b6ba
commit 9087f590b2
No known key found for this signature in database
3 changed files with 10 additions and 18 deletions
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4
backend/pkg/database/gorm_repository_query.go
View File

@ -3,6 +3,7 @@ package database
import (
"context"
"fmt"
"sort"
"strconv"
"strings"
"time"
@ -232,8 +233,11 @@ func (gr *GormRepository) sqlQueryResources(ctx context.Context, query models.Qu
//ensure Where and From clauses are unique
whereClauses = lo.Uniq(whereClauses)
whereClauses = lo.Compact(whereClauses)
sort.Strings(whereClauses)
fromClauses = lo.Uniq(fromClauses)
fromClauses = lo.Compact(fromClauses)
sort.Strings(fromClauses)
sort.Strings(selectClauses)
sqlQuery := gr.GormClient.WithContext(ctx).
Select(strings.Join(selectClauses, ", ")).

12
backend/pkg/database/gorm_repository_query_sql_test.go
View File

@ -135,14 +135,14 @@ func (suite *RepositorySqlTestSuite) TestQueryResources_SQL_WithMultipleWhereCon
require.Equal(suite.T(),
strings.Join([]string{
"SELECT fhir.*",
"FROM fhir_observation as fhir, json_each(fhir.code) as codeJson, json_each(fhir.category) as categoryJson",
"WHERE ((codeJson.value ->> '$.code' = ?)) AND ((categoryJson.value ->> '$.code' = ?)) AND (user_id = ?)",
"FROM fhir_observation as fhir, json_each(fhir.category) as categoryJson, json_each(fhir.code) as codeJson",
"WHERE ((categoryJson.value ->> '$.code' = ?)) AND ((codeJson.value ->> '$.code' = ?)) AND (user_id = ?)",
"GROUP BY `fhir`.`id`",
"ORDER BY fhir.sort_date DESC",
}, " "),
sqlString)
require.Equal(suite.T(), sqlParams, []interface{}{
"test_code", "12345", "00000000-0000-0000-0000-000000000000",
"12345", "test_code", "00000000-0000-0000-0000-000000000000",
})
}
@ -281,7 +281,7 @@ func (suite *RepositorySqlTestSuite) TestQueryResources_SQL_WithPrimitiveCountBy
require.NoError(suite.T(), err)
require.Equal(suite.T(),
strings.Join([]string{
"SELECT fhir.instantiatesUri as label, count(*) as value",
"SELECT count(*) as value, fhir.instantiatesUri as label",
"FROM fhir_care_plan as fhir, json_each(fhir.activityCode) as activityCodeJson",
"WHERE ((activityCodeJson.value ->> '$.code' = ?)) AND (user_id = ?)",
"GROUP BY `fhir`.`instantiatesUri`",
@ -318,7 +318,7 @@ func (suite *RepositorySqlTestSuite) TestQueryResources_SQL_WithKeywordCountByAg
require.NoError(suite.T(), err)
require.Equal(suite.T(),
strings.Join([]string{
"SELECT fhir.source_resource_type as label, count(*) as value",
"SELECT count(*) as value, fhir.source_resource_type as label",
"FROM fhir_care_plan as fhir, json_each(fhir.activityCode) as activityCodeJson",
"WHERE ((activityCodeJson.value ->> '$.code' = ?)) AND (user_id = ?)",
"GROUP BY `fhir`.`source_resource_type`",
@ -353,7 +353,7 @@ func (suite *RepositorySqlTestSuite) TestQueryResources_SQL_WithWildcardCountByA
require.NoError(suite.T(), err)
require.Equal(suite.T(),
strings.Join([]string{
"SELECT fhir.source_resource_type as label, count(*) as value",
"SELECT count(*) as value, fhir.source_resource_type as label",
"FROM fhir_care_plan as fhir",
"WHERE (user_id = ?)",
"GROUP BY `fhir`.`source_resource_type`",

12
go.sum
View File

@ -438,10 +438,8 @@ github.com/icrowley/fake v0.0.0-20180203215853-4178557ae428/go.mod h1:uhpZMVGzny
github.com/imdario/mergo v0.3.5/go.mod h1:2EnlNZ0deacrJVfApfmtdGgDfMuh/nq6Ok1EcJh5FfA=
github.com/imdario/mergo v0.3.6/go.mod h1:2EnlNZ0deacrJVfApfmtdGgDfMuh/nq6Ok1EcJh5FfA=
github.com/inconshreveable/mousetrap v1.0.0/go.mod h1:PxqpIevigyE2G7u3NXJIT2ANytuPF1OarO4DADm73n8=
github.com/jackc/chunkreader v1.0.0 h1:4s39bBR8ByfqH+DKm8rQA3E1LHZWB9XWcrz8fqaZbe0=
github.com/jackc/chunkreader v1.0.0/go.mod h1:RT6O25fNZIuasFJRyZ4R/Y2BbhasbmZXF9QQ7T3kePo=
github.com/jackc/chunkreader/v2 v2.0.0/go.mod h1:odVSm741yZoC3dpHEUXIqA9tQRhFrgOHwnPIn9lDKlk=
github.com/jackc/chunkreader/v2 v2.0.1 h1:i+RDz65UE+mmpjTfyz0MoVTnzeYxroil2G82ki7MGG8=
github.com/jackc/chunkreader/v2 v2.0.1/go.mod h1:odVSm741yZoC3dpHEUXIqA9tQRhFrgOHwnPIn9lDKlk=
github.com/jackc/pgconn v0.0.0-20190420214824-7e0022ef6ba3/go.mod h1:jkELnwuX+w9qN5YIfX0fl88Ehu4XC3keFuOJJk9pcnA=
github.com/jackc/pgconn v0.0.0-20190824142844-760dd75542eb/go.mod h1:lLjNuW/+OfW9/pnVKPazfWOgNfH2aPem8YQ7ilXGvJE=
@ -449,16 +447,13 @@ github.com/jackc/pgconn v0.0.0-20190831204454-2fabfa3c18b7/go.mod h1:ZJKsE/KZfsU
github.com/jackc/pgconn v1.8.0/go.mod h1:1C2Pb36bGIP9QHGBYCjnyhqu7Rv3sGshaQUvmfGIB/o=
github.com/jackc/pgconn v1.9.0/go.mod h1:YctiPyvzfU11JFxoXokUOOKQXQmDMoJL9vJzHH8/2JY=
github.com/jackc/pgconn v1.9.1-0.20210724152538-d89c8390a530/go.mod h1:4z2w8XhRbP1hYxkpTuBjTS3ne3J48K83+u0zoyvg2pI=
github.com/jackc/pgconn v1.11.0 h1:HiHArx4yFbwl91X3qqIHtUFoiIfLNJXCQRsnzkiwwaQ=
github.com/jackc/pgconn v1.11.0/go.mod h1:4z2w8XhRbP1hYxkpTuBjTS3ne3J48K83+u0zoyvg2pI=
github.com/jackc/pgio v1.0.0 h1:g12B9UwVnzGhueNavwioyEEpAmqMe1E/BN9ES+8ovkE=
github.com/jackc/pgio v1.0.0/go.mod h1:oP+2QK2wFfUWgr+gxjoBH9KGBb31Eio69xUb0w5bYf8=
github.com/jackc/pgmock v0.0.0-20190831213851-13a1b77aafa2/go.mod h1:fGZlG77KXmcq05nJLRkk0+p82V8B8Dw8KN2/V9c/OAE=
github.com/jackc/pgmock v0.0.0-20201204152224-4fe30f7445fd/go.mod h1:hrBW0Enj2AZTNpt/7Y5rr2xe/9Mn757Wtb2xeBzPv2c=
github.com/jackc/pgmock v0.0.0-20210724152146-4ad1a8207f65/go.mod h1:5R2h2EEX+qri8jOWMbJCtaPWkrrNc7OHwsp2TCqp7ak=
github.com/jackc/pgpassfile v1.0.0 h1:/6Hmqy13Ss2zCq62VdNG8tM1wchn8zjSGOBJ6icpsIM=
github.com/jackc/pgpassfile v1.0.0/go.mod h1:CEx0iS5ambNFdcRtxPj5JhEz+xB6uRky5eyVu/W2HEg=
github.com/jackc/pgproto3 v1.1.0 h1:FYYE4yRw+AgI8wXIinMlNjBbp/UitDJwfj5LqqewP1A=
github.com/jackc/pgproto3 v1.1.0/go.mod h1:eR5FA3leWg7p9aeAqi37XOTgTIbkABlvcPB3E5rlc78=
github.com/jackc/pgproto3/v2 v2.0.0-alpha1.0.20190420180111-c116219b62db/go.mod h1:bhq50y+xrl9n5mRYyCBFKkpRVTLYJVWeCc+mEAI3yXA=
github.com/jackc/pgproto3/v2 v2.0.0-alpha1.0.20190609003834-432c2951c711/go.mod h1:uH0AWtUmuShn0bcesswc4aBTWGvw0cAxIJp+6OB//Wg=
@ -466,9 +461,7 @@ github.com/jackc/pgproto3/v2 v2.0.0-rc3/go.mod h1:ryONWYqW6dqSg1Lw6vXNMXoBJhpzvW
github.com/jackc/pgproto3/v2 v2.0.0-rc3.0.20190831210041-4c03ce451f29/go.mod h1:ryONWYqW6dqSg1Lw6vXNMXoBJhpzvWKnT95C46ckYeM=
github.com/jackc/pgproto3/v2 v2.0.6/go.mod h1:WfJCnwN3HIg9Ish/j3sgWXnAfK8A9Y0bwXYU5xKaEdA=
github.com/jackc/pgproto3/v2 v2.1.1/go.mod h1:WfJCnwN3HIg9Ish/j3sgWXnAfK8A9Y0bwXYU5xKaEdA=
github.com/jackc/pgproto3/v2 v2.2.0 h1:r7JypeP2D3onoQTCxWdTpCtJ4D+qpKr0TxvoyMhZ5ns=
github.com/jackc/pgproto3/v2 v2.2.0/go.mod h1:WfJCnwN3HIg9Ish/j3sgWXnAfK8A9Y0bwXYU5xKaEdA=
github.com/jackc/pgservicefile v0.0.0-20200714003250-2b9c44734f2b h1:C8S2+VttkHFdOOCXJe+YGfa4vHYwlt4Zx+IVXQ97jYg=
github.com/jackc/pgservicefile v0.0.0-20200714003250-2b9c44734f2b/go.mod h1:vsD4gTJCa9TptPL8sPkXrLZ+hDuNrZCnj29CQpr4X1E=
github.com/jackc/pgservicefile v0.0.0-20221227161230-091c0ba34f0a h1:bbPeKD0xmW/Y25WS6cokEszi5g+S0QxI/d45PkRi7Nk=
github.com/jackc/pgservicefile v0.0.0-20221227161230-091c0ba34f0a/go.mod h1:5TJZWKEWniPve33vlWYSoGYefn3gLQRzjfDlhSJ9ZKM=
@ -476,13 +469,11 @@ github.com/jackc/pgtype v0.0.0-20190421001408-4ed0de4755e0/go.mod h1:hdSHsc1V01C
github.com/jackc/pgtype v0.0.0-20190824184912-ab885b375b90/go.mod h1:KcahbBH1nCMSo2DXpzsoWOAfFkdEtEJpPbVLq8eE+mc=
github.com/jackc/pgtype v0.0.0-20190828014616-a8802b16cc59/go.mod h1:MWlu30kVJrUS8lot6TQqcg7mtthZ9T0EoIBFiJcmcyw=
github.com/jackc/pgtype v1.8.1-0.20210724151600-32e20a603178/go.mod h1:C516IlIV9NKqfsMCXTdChteoXmwgUceqaLfjg2e3NlM=
github.com/jackc/pgtype v1.10.0 h1:ILnBWrRMSXGczYvmkYD6PsYyVFUNLTnIUJHHDLmqk38=
github.com/jackc/pgtype v1.10.0/go.mod h1:LUMuVrfsFfdKGLw+AFFVv6KtHOFMwRgDDzBt76IqCA4=
github.com/jackc/pgx/v4 v4.0.0-20190420224344-cc3461e65d96/go.mod h1:mdxmSJJuR08CZQyj1PVQBHy9XOp5p8/SHH6a0psbY9Y=
github.com/jackc/pgx/v4 v4.0.0-20190421002000-1b8f0016e912/go.mod h1:no/Y67Jkk/9WuGR0JG/JseM9irFbnEPbuWV2EELPNuM=
github.com/jackc/pgx/v4 v4.0.0-pre1.0.20190824185557-6972a5742186/go.mod h1:X+GQnOEnf1dqHGpw7JmHqHc1NxDoalibchSk9/RWuDc=
github.com/jackc/pgx/v4 v4.12.1-0.20210724153913-640aa07df17c/go.mod h1:1QD0+tgSXP7iUjYm9C1NxKhny7lq6ee99u/z+IHFcgs=
github.com/jackc/pgx/v4 v4.15.0 h1:B7dTkXsdILD3MF987WGGCcg+tvLW6bZJdEcqVFeU//w=
github.com/jackc/pgx/v4 v4.15.0/go.mod h1:D/zyOyXiaM1TmVWnOM18p0xdDtdakRBa0RsVGI3U3bw=
github.com/jackc/pgx/v5 v5.4.3 h1:cxFyXhxlvAifxnkKKdlxv8XqUf59tDlYjnV5YYfsJJY=
github.com/jackc/pgx/v5 v5.4.3/go.mod h1:Ig06C2Vu0t5qXC60W8sqIthScaEnFvojjj9dSljmHRA=
@ -1288,7 +1279,6 @@ gorm.io/datatypes v1.0.7 h1:8NhJN4+annFjwV1WufDhFiPjdUvV1lSGUdg1UCjQIWY=
gorm.io/datatypes v1.0.7/go.mod h1:l9qkCuy0CdzDEop9HKUdcnC9gHC2sRlaFtHkTzsZRqg=
gorm.io/driver/mysql v1.3.2 h1:QJryWiqQ91EvZ0jZL48NOpdlPdMjdip1hQ8bTgo4H7I=
gorm.io/driver/mysql v1.3.2/go.mod h1:ChK6AHbHgDCFZyJp0F+BmVGb06PSIoh9uVYKAlRbb2U=
gorm.io/driver/postgres v1.3.4 h1:evZ7plF+Bp+Lr1mO5NdPvd6M/N98XtwHixGB+y7fdEQ=
gorm.io/driver/postgres v1.3.4/go.mod h1:y0vEuInFKJtijuSGu9e5bs5hzzSzPK+LancpKpvbRBw=
gorm.io/driver/postgres v1.5.3 h1:qKGY5CPHOuj47K/VxbCXJfFvIUeqMSXXadqdCY+MbBU=
gorm.io/driver/postgres v1.5.3/go.mod h1:F+LtvlFhZT7UBiA81mC9W6Su3D4WUhSboc/36QZU0gk=
@ -1299,8 +1289,6 @@ gorm.io/driver/sqlserver v1.3.1/go.mod h1:w25Vrx2BG+CJNUu/xKbFhaKlGxT/nzRkhWCCop
gorm.io/gorm v1.23.1/go.mod h1:l2lP/RyAtc1ynaTjFksBde/O8v9oOGIApu2/xRitmZk=
gorm.io/gorm v1.23.6/go.mod h1:l2lP/RyAtc1ynaTjFksBde/O8v9oOGIApu2/xRitmZk=
gorm.io/gorm v1.24.0/go.mod h1:DVrVomtaYTbqs7gB/x2uVvqnXzv0nqjB396B8cG4dBA=
gorm.io/gorm v1.24.1 h1:CgvzRniUdG67hBAzsxDGOAuq4Te1osVMYsa1eQbd4fs=
gorm.io/gorm v1.24.1/go.mod h1:DVrVomtaYTbqs7gB/x2uVvqnXzv0nqjB396B8cG4dBA=
gorm.io/gorm v1.25.2-0.20230530020048-26663ab9bf55 h1:sC1Xj4TYrLqg1n3AN10w871An7wJM0gzgcm8jkIkECQ=
gorm.io/gorm v1.25.2-0.20230530020048-26663ab9bf55/go.mod h1:L4uxeKpfBml98NYqVqwAdmV1a2nBtAec/cf3fpucW/k=
gotest.tools v2.2.0+incompatible/go.mod h1:DsYFclhRJ6vuDpmuTbkuFWG+y2sxOXAzmJt81HFBacw=