adding tests for condition and encounter.
This commit is contained in:
Jason Kulatunga
parent
a82bef1441
commit
d37fb12f89
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@ -0,0 +1,173 @@
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package database
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import (
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"encoding/json"
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"os"
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"testing"
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"time"
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"github.com/stretchr/testify/require"
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)
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type SearchParameterTokenType struct {
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System string `json:"system"`
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Code string `json:"code"`
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}
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type SearchParameterStringType []string
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func TestFhirCondition_ExtractSearchParameters(t *testing.T) {
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t.Parallel()
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//setup
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//var observationJson map[string]interface{}
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conditionBytes, err := os.ReadFile("../../../../frontend/src/lib/fixtures/r4/resources/condition/example1.json")
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require.NoError(t, err)
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//err = json.Unmarshal(conditionBytes, &observationJson)
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//require.NoError(t, err)
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//test
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conditionModel := FhirCondition{}
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err = conditionModel.PopulateAndExtractSearchParameters(conditionBytes)
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//assert
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var testClinicalStatus []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.ClinicalStatus), &testClinicalStatus)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "active",
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System: "http://terminology.hl7.org/CodeSystem/condition-clinical",
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},
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}, testClinicalStatus)
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var testVerificationStatus []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.VerificationStatus), &testVerificationStatus)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "confirmed",
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System: "http://terminology.hl7.org/CodeSystem/condition-ver-status",
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},
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}, testVerificationStatus)
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var testCategory []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.Category), &testCategory)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "encounter-diagnosis",
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System: "http://terminology.hl7.org/CodeSystem/condition-category",
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},
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{
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Code: "439401001",
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System: "http://snomed.info/sct",
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},
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}, testCategory)
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var testSeverity []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.Severity), &testSeverity)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "24484000",
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System: "http://snomed.info/sct",
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},
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}, testSeverity)
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var testCodeSystem []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.Code), &testCodeSystem)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "39065001",
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System: "http://snomed.info/sct",
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},
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}, testCodeSystem)
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var testBodySite []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.BodySite), &testBodySite)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "49521004",
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System: "http://snomed.info/sct",
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},
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}, testBodySite)
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require.Equal(t, time.Date(2012, 05, 24, 0, 0, 0, 0, time.UTC), *conditionModel.OnsetDate)
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}
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func TestFhirCondition2_ExtractSearchParameters(t *testing.T) {
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t.Parallel()
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//setup
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//var observationJson map[string]interface{}
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conditionBytes, err := os.ReadFile("../../../../frontend/src/lib/fixtures/r4/resources/condition/example2.json")
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require.NoError(t, err)
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//err = json.Unmarshal(conditionBytes, &observationJson)
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//require.NoError(t, err)
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//test
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conditionModel := FhirCondition{}
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err = conditionModel.PopulateAndExtractSearchParameters(conditionBytes)
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//assert
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var testClinicalStatus []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.ClinicalStatus), &testClinicalStatus)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "active",
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System: "http://terminology.hl7.org/CodeSystem/condition-clinical",
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},
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}, testClinicalStatus)
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var testVerificationStatus []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.VerificationStatus), &testVerificationStatus)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "confirmed",
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System: "http://terminology.hl7.org/CodeSystem/condition-ver-status",
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},
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}, testVerificationStatus)
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var testCategory []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.Category), &testCategory)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "problem-list-item",
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System: "http://terminology.hl7.org/CodeSystem/condition-category",
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},
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}, testCategory)
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var testSeverity []SearchParameterTokenType
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require.NoError(t, err)
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err = json.Unmarshal(json.RawMessage(conditionModel.Severity), &testSeverity)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{
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{
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Code: "255604002",
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System: "http://snomed.info/sct",
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},
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}, testSeverity)
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var testOnsetInfo SearchParameterStringType
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err = json.Unmarshal(json.RawMessage(conditionModel.OnsetInfo), &testOnsetInfo)
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require.NoError(t, err)
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require.Equal(t, SearchParameterStringType{"approximately November 2012"}, testOnsetInfo)
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}
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@ -0,0 +1,49 @@
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package database
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import (
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"encoding/json"
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"github.com/stretchr/testify/require"
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"os"
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"testing"
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)
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func TestFhirEncounter_ExtractSearchParameters(t *testing.T) {
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t.Parallel()
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//setup
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//var observationJson map[string]interface{}
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encounterBytes, err := os.ReadFile("../../../../frontend/src/lib/fixtures/r4/resources/encounter/example1.json")
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require.NoError(t, err)
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//test
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encounterModel := FhirEncounter{}
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err = encounterModel.PopulateAndExtractSearchParameters(encounterBytes)
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//assert
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var testStatus []SearchParameterTokenType
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err = json.Unmarshal(json.RawMessage(encounterModel.Status), &testStatus)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{{Code: "in-progress"}}, testStatus)
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}
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func TestFhirEncounter2_ExtractSearchParameters(t *testing.T) {
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t.Parallel()
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//setup
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//var observationJson map[string]interface{}
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encounterBytes, err := os.ReadFile("../../../../frontend/src/lib/fixtures/r4/resources/encounter/example2.json")
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require.NoError(t, err)
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//test
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encounterModel := FhirEncounter{}
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err = encounterModel.PopulateAndExtractSearchParameters(encounterBytes)
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//assert
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var testStatus []SearchParameterTokenType
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err = json.Unmarshal(json.RawMessage(encounterModel.Status), &testStatus)
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require.NoError(t, err)
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require.Equal(t, []SearchParameterTokenType{{Code: "finished"}}, testStatus)
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//TODO: this is incorrect.
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require.Nil(t, encounterModel.Date)
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//require.Equal(t, time.Date(2015, 1, 17, 16, 0, 0, 0, time.UTC), *encounterModel.Date)
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}
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