Commit Graph

57 Commits

Author SHA1 Message Date
Jason Kulatunga 77cb81435c
Encryption At Rest (#284) 2023-11-07 15:17:00 -08:00
Jason Kulatunga 6858ae8d4c
added database migration framework. 2023-10-17 11:46:08 -07:00
Nicholas Murray abbfa9a93e backend/pkg/database: move all common Gorm functionality to new files 2023-10-13 16:57:43 -07:00
Jason Kulatunga 504cd4264c
[WIP] adding factory pattern support to Database package.
Users can select database type using database.type configuration when calling NewRepository()
2023-10-12 14:19:12 -07:00
Jason Kulatunga e5f920c2ec
when server restarts, we should unlock all locked jobs, and set their status to failed
make sure we can customize the limit value for Background Job query.

fixes #267
2023-10-09 17:16:18 -07:00
Jason Kulatunga dcabfc8cd9
Background Jobs (#266) 2023-10-08 16:29:26 -07:00
Jason Kulatunga 345b2d5cfd
working medical history pagination
- performance improvements by using placeholder ids for graph
- only inflating with real resources once we've calculated pagination window.
2023-10-03 17:25:30 -07:00
Jason Kulatunga b6da493d62 removed singleton eventbus. Moved to application init.
Added interface for eventbus.
verified working.
2023-09-20 14:57:05 -07:00
Jason Kulatunga 9e1c7455d1 moved event bus into its own package.
created models for event bus messaging.
added logger.
added source complete and sync events.
2023-09-10 09:25:15 -07:00
Jason Kulatunga 6a3afe150e working private event notifications. 2023-09-10 09:25:15 -07:00
Jason Kulatunga 862e3d6ea7 pass in the event bus to the DatabaseRepository for notifications. 2023-09-10 09:25:15 -07:00
Jason Kulatunga 0a9eb88b1b
fixing module name (fasten-onprem vs fastenhealth-onprem) 2023-08-27 17:09:46 -07:00
Jason Kulatunga 31479a4fc4 adding support for user settings (Remote Dashboard Locations) 2023-08-25 08:36:12 -07:00
Jason Kulatunga 2f292397f7 where possible store the SourceURI with the resource.
requires updated version of Fasten sources (better Binary compatibility)
2023-08-17 17:19:26 -06:00
Jason Kulatunga 410696c26f adding pagination to the explore page. fixes #216
simplified fallback component for table list
2023-08-12 10:27:46 -06:00
Jason Kulatunga 28cb91817a
make sure sortTitle and SortDate are correctly set when extracting searchParamters
Failures during searchparameter extraction should not cause the resource to be skipped.
Update searchparameter extraction to correctly handle Time objects
Update searchparameter extraction to default to nil if empty list is returned during extraction.
2023-08-01 20:29:35 -07:00
Jason Kulatunga f1b7e80e13
make sure that we print the error response body if we can.
Added an update source method.
After sync, if sourcecredential access token/refresh token has been updated make sure we store it int he database.
2023-07-20 21:43:37 -07:00
Jason Kulatunga 12cfcaee41
make sure that the sourcecredential interface is a pointer reciever. 2023-07-14 19:52:02 -07:00
Jason Kulatunga f1f2da2dd3
Widget Dashboard Queries using extracted Search Parameters (#179) 2023-07-08 07:43:30 -07:00
Jason Kulatunga 2e53ce79c7
make sure we can dynamically generate directed graph relationships on… (#131) 2023-04-22 22:08:58 -07:00
Jason Kulatunga 01b6cc3aee
started working on DICOM support (stored in Media object) (#116) 2023-04-04 19:25:48 -07:00
Jason Kulatunga 390cea6108
adding a glossary endpoint which attempts to get patient-friendly descriptions from code. (#120) 2023-03-21 08:04:43 -07:00
Jason Kulatunga e68900b1bc make sure we handle error if the current user is invalid. 2023-01-15 11:07:41 -08:00
Jason Kulatunga cdf7f83777
UI Tweaks (#32) 2023-01-15 10:25:46 -08:00
Jason Kulatunga f903c38b55
adding support for Composition resource type (Custom grouping) (#20) 2023-01-10 19:23:47 -08:00
Jason Kulatunga ba333fce42 make sure sortTitle and sortDate is stored with every resource in the database. 2023-01-07 09:41:43 -08:00
Jason Kulatunga 918c856338 adding allow_unsafe_endpoints config option.
adding flattend resource graph.
adding Reciprocal resources
adding a report labs page.
2022-12-21 19:51:02 -08:00
Jason Kulatunga 6fd69575d1
Better Reporting (#12) 2022-12-17 15:10:19 -08:00
Jason Kulatunga e8981ff9bb simplify the Source-patient query to work in Postgres.
Make sure that we can handle auth_username provided by context object (in cloud).
2022-12-03 19:16:32 -08:00
Jason Kulatunga 0d57a75890 updating database interface.
Using public database fields.
2022-12-03 12:48:35 -08:00
Jason Kulatunga 492d2a7efb make the SqliteRepository accessible so we can inherit. 2022-12-03 11:08:14 -08:00
Jason Kulatunga e360369706
begin restoring Sqlite functionality. (#11) 2022-12-02 19:40:58 -08:00
Jason Kulatunga f2bb44e8be refactor backend to remove all storage logic. Just auth and metadata endpoints now.
Adding docker image for couchdb and addign docker-compose file.
2022-10-08 19:40:33 -07:00
Jason Kulatunga 61ed115dae fixing breadcrumbs
make sure patient is sent with SourceSummary.
2022-09-25 18:35:36 -07:00
Jason Kulatunga cd6a0fb68f working getResourceBySourceId query and api. 2022-09-25 16:57:30 -07:00
Jason Kulatunga 61d16cfb55 fixed error where the source ID was not populated whne source is first created, causing next SyncAll command to have invalid source_id values.
Created default SyncAll function (using $everything) and SyncAllByResourceName which can be used as a fallback.

cleaned up DB layer , dont use Model unless Gorm cannot figure out the table. Use pointers consistently.
When syncing resources, store errors in a map, so that all resources get synced before returing errors
2022-09-24 22:18:07 -07:00
Jason Kulatunga cc485a0615 support logica service.
update dashboard.
moved RAW API endpoint outside of the secure block.
2022-09-18 00:36:53 -07:00
Jason Kulatunga 02dcbcc507 working summary api 2022-09-17 10:14:59 -07:00
Jason Kulatunga 7bced71569 adding source summary endpoint
added generic resource list component
added resource-list outlet directive and component.
2022-09-17 00:12:12 -07:00
Jason Kulatunga 11605aae93 added a getResources and ListResourceFhir API endpoint 2022-09-14 21:56:32 -07:00
Jason Kulatunga 5ae77a0459 adding sourceDetail component.
make sure we 404 if an api endpoint doesn't exist.
2022-09-14 19:59:16 -07:00
Jason Kulatunga 129d728d34 consistently use source_type / sourceType instead of provider_id providerId.
using LighthouseService instead of PassportService.
2022-09-13 21:15:18 -04:00
Jason Kulatunga 360af5adee renamed usages of providerId to sourceType 2022-09-13 21:02:26 -04:00
Jason Kulatunga 1535f139c1 when making requests to the db, use the current user context. 2022-09-12 21:20:56 -04:00
Jason Kulatunga 1a3dce77cb adding form validation on signup.
adding auth/signin and auth/signup api endpoints.
2022-09-11 23:59:13 -04:00
Jason Kulatunga aefe96c71e added a details page (unwired)
fixed logo
print more error messages.
added aetna client.
2022-09-10 23:12:29 -04:00
Jason Kulatunga 187d72b085 added mechanism to query resources stored in DB.
Adding raw lookup from source.
2022-09-08 22:53:54 -07:00
Jason Kulatunga c9fc23e3a9 sync all resources on completion. 2022-09-08 21:14:03 -07:00
Jason Kulatunga 96465f23df adding test framework/recordings for client.
Adding generic upsert fuction for models.
2022-09-01 18:54:01 -07:00
Jason Kulatunga 79755d8e8b fixing composite unique index (when embedded the index is not unique).
creating a lookup table for retrieving Resource references (and generated UUIDs).
Adding organization processing.
2022-08-30 21:36:40 -07:00