Nicholas Murray
c90f3c0d88
backend/pkg/database: to squash, git add renamed files
2023-10-14 10:33:37 -07:00
Nicholas Murray
abbfa9a93e
backend/pkg/database: move all common Gorm functionality to new files
2023-10-13 16:57:43 -07:00
Jason Kulatunga
504cd4264c
[WIP] adding factory pattern support to Database package.
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Users can select database type using database.type configuration when calling NewRepository()
2023-10-12 14:19:12 -07:00
Jason Kulatunga
e5f920c2ec
when server restarts, we should unlock all locked jobs, and set their status to failed
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make sure we can customize the limit value for Background Job query.
fixes #267
2023-10-09 17:16:18 -07:00
Jason Kulatunga
dcabfc8cd9
Background Jobs ( #266 )
2023-10-08 16:29:26 -07:00
Jason Kulatunga
1fda51074e
finishing pagination for medical history page.
2023-10-03 17:27:08 -07:00
Jason Kulatunga
345b2d5cfd
working medical history pagination
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- performance improvements by using placeholder ids for graph
- only inflating with real resources once we've calculated pagination window.
2023-10-03 17:25:30 -07:00
Jason Kulatunga
21dc5ebe92
WIP paginate graph (medical history view)
2023-10-03 17:19:13 -07:00
Jason Kulatunga
595541f3a0
correctly handle query for token with system but no code.
2023-10-02 16:07:25 -07:00
Jason Kulatunga
623c9ab663
adding tests for processing aggregation parameters.
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make sure frontend code uses new aggregation parameter structure.
2023-10-02 14:27:35 -07:00
Jason Kulatunga
01c293bf40
provide mechanism to call functions when doing aggregations.
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provide a standardized format for token aggregation ($.system|$.code)
2023-10-02 13:42:41 -07:00
Jason Kulatunga
af2344ec00
add sort_date as a DB field that can be queried.
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make sure that order_by is automatically desc for date fields.
2023-10-01 19:15:24 -07:00
Jason Kulatunga
6d831f6ee7
make sure we can send limit and offset when querying.
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list the diagnostic reports in the dropdown for filtering.
2023-10-01 17:05:55 -07:00
Jason Kulatunga
c8718b2d8f
adding NoopEventBus version. Fixing tests.
2023-09-20 14:57:05 -07:00
Jason Kulatunga
b6da493d62
removed singleton eventbus. Moved to application init.
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Added interface for eventbus.
verified working.
2023-09-20 14:57:05 -07:00
Jason Kulatunga
9e1c7455d1
moved event bus into its own package.
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created models for event bus messaging.
added logger.
added source complete and sync events.
2023-09-10 09:25:15 -07:00
Jason Kulatunga
6a3afe150e
working private event notifications.
2023-09-10 09:25:15 -07:00
Jason Kulatunga
862e3d6ea7
pass in the event bus to the DatabaseRepository for notifications.
2023-09-10 09:25:15 -07:00
Jason Kulatunga
0a9eb88b1b
fixing module name (fasten-onprem vs fastenhealth-onprem)
2023-08-27 17:09:46 -07:00
Jason Kulatunga
9a4dcf9852
adding tests for dashboard settings
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fixing database persistence for settings.
using reflection instead of abusing AppConfig for parsing UserSettingsEntries to UserSettings struct.
2023-08-25 08:36:12 -07:00
Jason Kulatunga
31479a4fc4
adding support for user settings (Remote Dashboard Locations)
2023-08-25 08:36:12 -07:00
Jason Kulatunga
3fe72918fd
adding ability to count by wildcard (source_resource_type).
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internal fields like `id`, `source_id`, `source_resource_id` and `source_resource_type` are now queryable via keyword type.
2023-08-23 12:24:08 -07:00
Jason Kulatunga
2a8b302319
fixing tests.
2023-08-17 17:19:26 -06:00
Jason Kulatunga
3c30298b7c
fixing tests.
2023-08-17 17:19:26 -06:00
Jason Kulatunga
2f292397f7
where possible store the SourceURI with the resource.
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requires updated version of Fasten sources (better Binary compatibility)
2023-08-17 17:19:26 -06:00
Jason Kulatunga
b3a173df01
working aggregation code
2023-08-14 17:23:36 -06:00
Jason Kulatunga
6f56fa9c3b
working aggregation code.
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added tests for sql generation.
2023-08-14 17:23:36 -06:00
Jason Kulatunga
2c5133bef7
adding testing framework for Aggregation code.
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WIP.
2023-08-14 17:23:36 -06:00
Jason Kulatunga
410696c26f
adding pagination to the explore page. fixes #216
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simplified fallback component for table list
2023-08-12 10:27:46 -06:00
Jason Kulatunga
0397a2f0cb
sort all resources by "sort_date" column during query
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return units when querying
rename all usages of "source" page to "explore"
adding new explore page.
fix dashboard widgets to correctly
2023-08-08 21:08:17 -07:00
Jason Kulatunga
28cb91817a
make sure sortTitle and SortDate are correctly set when extracting searchParamters
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Failures during searchparameter extraction should not cause the resource to be skipped.
Update searchparameter extraction to correctly handle Time objects
Update searchparameter extraction to default to nil if empty list is returned during extraction.
2023-08-01 20:29:35 -07:00
Jason Kulatunga
9e776c60b8
make sure HumanName and Address types are correctly extracted as searchable strings.
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Make sure they can be searched against using the query endpoint.
2023-07-31 18:46:52 -07:00
Jason Kulatunga
f1b7e80e13
make sure that we print the error response body if we can.
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Added an update source method.
After sync, if sourcecredential access token/refresh token has been updated make sure we store it int he database.
2023-07-20 21:43:37 -07:00
Jason Kulatunga
12cfcaee41
make sure that the sourcecredential interface is a pointer reciever.
2023-07-14 19:52:02 -07:00
Jason Kulatunga
f1f2da2dd3
Widget Dashboard Queries using extracted Search Parameters ( #179 )
2023-07-08 07:43:30 -07:00
Jason Kulatunga
2eced4fe91
Storybook Integration for Component testing. ( #142 )
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Co-authored-by: Serinus1 <junkmayle670@yahoo.com>
2023-05-05 09:06:33 -07:00
Jason Kulatunga
2e53ce79c7
make sure we can dynamically generate directed graph relationships on… ( #131 )
2023-04-22 22:08:58 -07:00
Jason Kulatunga
01b6cc3aee
started working on DICOM support (stored in Media object) ( #116 )
2023-04-04 19:25:48 -07:00
Jason Kulatunga
390cea6108
adding a glossary endpoint which attempts to get patient-friendly descriptions from code. ( #120 )
2023-03-21 08:04:43 -07:00
Jason Kulatunga
e68900b1bc
make sure we handle error if the current user is invalid.
2023-01-15 11:07:41 -08:00
Jason Kulatunga
cdf7f83777
UI Tweaks ( #32 )
2023-01-15 10:25:46 -08:00
Jason Kulatunga
f903c38b55
adding support for Composition resource type (Custom grouping) ( #20 )
2023-01-10 19:23:47 -08:00
Jason Kulatunga
ba333fce42
make sure sortTitle and sortDate is stored with every resource in the database.
2023-01-07 09:41:43 -08:00
Jason Kulatunga
d0f87c4381
added tests to ensure that implementation stays in sync with interfaces from fasten-sources lib.
2023-01-03 20:50:43 -08:00
Jason Kulatunga
918c856338
adding allow_unsafe_endpoints config option.
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adding flattend resource graph.
adding Reciprocal resources
adding a report labs page.
2022-12-21 19:51:02 -08:00
Jason Kulatunga
6fd69575d1
Better Reporting ( #12 )
2022-12-17 15:10:19 -08:00
Jason Kulatunga
e8981ff9bb
simplify the Source-patient query to work in Postgres.
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Make sure that we can handle auth_username provided by context object (in cloud).
2022-12-03 19:16:32 -08:00
Jason Kulatunga
0d57a75890
updating database interface.
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Using public database fields.
2022-12-03 12:48:35 -08:00
Jason Kulatunga
492d2a7efb
make the SqliteRepository accessible so we can inherit.
2022-12-03 11:08:14 -08:00
Jason Kulatunga
e360369706
begin restoring Sqlite functionality. ( #11 )
2022-12-02 19:40:58 -08:00