Jason Kulatunga
2c5133bef7
adding testing framework for Aggregation code.
...
WIP.
2023-08-14 17:23:36 -06:00
Jason Kulatunga
495fce5696
starting to work on GroupBy aggregations
2023-08-14 17:23:36 -06:00
Jason Kulatunga
1f113cdf63
make sure reference fields are correctly extracted and stored in the DB.
2023-08-13 15:28:03 -06:00
Jason Kulatunga
4dad809f19
removing Resource. segment of FHIRpath expressions (not supported)
2023-08-13 12:30:39 -06:00
Jason Kulatunga
ddbf65080d
fixing Condition onset and abatement extraction.
2023-08-13 12:21:43 -06:00
Jason Kulatunga
410696c26f
adding pagination to the explore page. fixes #216
...
simplified fallback component for table list
2023-08-12 10:27:46 -06:00
packagrio-bot
8c4e926d20
(v0.1.4) Automated packaging of release by Packagr
2023-08-09 04:12:38 +00:00
Jason Kulatunga
cb1dab738d
fix backend tests
2023-08-08 21:08:17 -07:00
Jason Kulatunga
0397a2f0cb
sort all resources by "sort_date" column during query
...
return units when querying
rename all usages of "source" page to "explore"
adding new explore page.
fix dashboard widgets to correctly
2023-08-08 21:08:17 -07:00
Jason Kulatunga
28cb91817a
make sure sortTitle and SortDate are correctly set when extracting searchParamters
...
Failures during searchparameter extraction should not cause the resource to be skipped.
Update searchparameter extraction to correctly handle Time objects
Update searchparameter extraction to default to nil if empty list is returned during extraction.
2023-08-01 20:29:35 -07:00
Jason Kulatunga
9e776c60b8
make sure HumanName and Address types are correctly extracted as searchable strings.
...
Make sure they can be searched against using the query endpoint.
2023-07-31 18:46:52 -07:00
Jason Kulatunga
94fa479ff8
update the generator script for FhirResource storage.
2023-07-31 18:46:52 -07:00
Jason Kulatunga
0517f9b350
make sure we can handle HumanName and Address type objects (convert to string).
2023-07-31 18:46:52 -07:00
Jason Kulatunga
6433de8f25
make sure refreshed token is stored in the database when making raw unsafe requests.
2023-07-30 19:51:47 -07:00
packagrio-bot
60bedabe01
(v0.1.3) Automated packaging of release by Packagr
2023-07-21 05:39:54 +00:00
Jason Kulatunga
07d01fc33b
fixing tests.
2023-07-20 22:08:31 -07:00
Jason Kulatunga
f1b7e80e13
make sure that we print the error response body if we can.
...
Added an update source method.
After sync, if sourcecredential access token/refresh token has been updated make sure we store it int he database.
2023-07-20 21:43:37 -07:00
Jason Kulatunga
a5b37159c1
- make sure that we can generate offline tokens for Epic providers (using dynamic client registration - https://fhir.epic.com/Documentation?docId=Oauth2§ion=Standalone-Oauth2-OfflineAccess-0 )
...
- when SourceCredential is sent to the CreateSource API, we'll check if dynamic client regirstion is enabled. If it is, we'll use this token to register a new client, store the client information, and geneate a new Access Token using the key pair associated with this newly registered client.
- added additional fields to SourceCredential table (registration_endpoint, dynamic_client_registration_mode, dynamic_client_jwks, dynamic_client_id)
- renamed RefreshTokens to SetTokens in SourceCredential model - to have consistent naming
- added IsDynamicClient and RefreshDynamicClientAccessToken methods to SourceCredential Model
fixes #178
2023-07-19 22:45:14 -07:00
packagrio-bot
879312a852
(v0.1.2) Automated packaging of release by Packagr
2023-07-16 19:57:20 +00:00
packagrio-bot
5e6c823b5b
(v0.1.1) Automated packaging of release by Packagr
2023-07-16 19:51:59 +00:00
packagrio-bot
40ca73ea2e
(v0.1.0) Automated packaging of release by Packagr
2023-07-16 19:40:50 +00:00
Jason Kulatunga
59fd25c8e8
do not print out the issuer key in plain text. only used for debugging.
2023-07-16 09:37:46 -07:00
Jason Kulatunga
12cfcaee41
make sure that the sourcecredential interface is a pointer reciever.
2023-07-14 19:52:02 -07:00
Jason Kulatunga
e60771c992
using fasten ascii art during startup.
2023-07-09 22:15:40 -07:00
Jason Kulatunga
50ba91ff93
differentiate error messages
...
adding 600+ manually downloaded logos, thanks to everyone who contributed!
2023-07-09 21:23:41 -07:00
Jason Kulatunga
f0fa05c297
adding new fhir resources.
2023-07-08 17:54:19 -07:00
Jason Kulatunga
f1f2da2dd3
Widget Dashboard Queries using extracted Search Parameters ( #179 )
2023-07-08 07:43:30 -07:00
packagrio-bot
b177ccc72b
(v0.0.12) Automated packaging of release by Packagr
2023-05-14 17:45:02 +00:00
packagrio-bot
3879156ff5
(v0.0.11) Automated packaging of release by Packagr
2023-05-05 16:07:50 +00:00
Jason Kulatunga
2eced4fe91
Storybook Integration for Component testing. ( #142 )
...
Co-authored-by: Serinus1 <junkmayle670@yahoo.com>
2023-05-05 09:06:33 -07:00
Jason Kulatunga
2e53ce79c7
make sure we can dynamically generate directed graph relationships on… ( #131 )
2023-04-22 22:08:58 -07:00
packagrio-bot
c2d251c56c
(v0.0.10) Automated packaging of release by Packagr
2023-04-15 17:18:10 +00:00
Jason Kulatunga
29ed792f03
Update version.go
2023-04-15 09:53:04 -07:00
Jason Kulatunga
01b6cc3aee
started working on DICOM support (stored in Media object) ( #116 )
2023-04-04 19:25:48 -07:00
Jason Kulatunga
390cea6108
adding a glossary endpoint which attempts to get patient-friendly descriptions from code. ( #120 )
2023-03-21 08:04:43 -07:00
packagrio-bot
64027777c1
(v0.0.8) Automated packaging of release by Packagr
2023-02-01 05:58:16 +00:00
Jason Kulatunga
d6a6654681
using packagr app for version bumping while still keeping branch rest… ( #56 )
2023-01-31 21:55:41 -08:00
Jason Kulatunga
668bccebbd
fix current version.
2023-01-31 18:58:04 -08:00
Jason Kulatunga
22f23e20f1
fixing config file -- correct database mount location.
2023-01-26 03:10:36 -08:00
Jason Kulatunga
e68900b1bc
make sure we handle error if the current user is invalid.
2023-01-15 11:07:41 -08:00
Jason Kulatunga
cdf7f83777
UI Tweaks ( #32 )
2023-01-15 10:25:46 -08:00
Jason Kulatunga
f903c38b55
adding support for Composition resource type (Custom grouping) ( #20 )
2023-01-10 19:23:47 -08:00
Jason Kulatunga
ba333fce42
make sure sortTitle and sortDate is stored with every resource in the database.
2023-01-07 09:41:43 -08:00
Jason Kulatunga
d0f87c4381
added tests to ensure that implementation stays in sync with interfaces from fasten-sources lib.
2023-01-03 20:50:43 -08:00
Jason Kulatunga
efe5f0a0a8
update fasten-sources library. ( #16 )
2023-01-03 11:11:04 -08:00
Jason Kulatunga
918c856338
adding allow_unsafe_endpoints config option.
...
adding flattend resource graph.
adding Reciprocal resources
adding a report labs page.
2022-12-21 19:51:02 -08:00
Jason Kulatunga
6fd69575d1
Better Reporting ( #12 )
2022-12-17 15:10:19 -08:00
Jason Kulatunga
f67c369a22
make SyncSourceResources exposed, so it can be used in Cloud version.
2022-12-03 22:33:27 -08:00
Jason Kulatunga
e8981ff9bb
simplify the Source-patient query to work in Postgres.
...
Make sure that we can handle auth_username provided by context object (in cloud).
2022-12-03 19:16:32 -08:00
Jason Kulatunga
1a18319c8c
tweaks to jwt to be consistent.
2022-12-03 17:15:19 -08:00
Jason Kulatunga
0d57a75890
updating database interface.
...
Using public database fields.
2022-12-03 12:48:35 -08:00
Jason Kulatunga
492d2a7efb
make the SqliteRepository accessible so we can inherit.
2022-12-03 11:08:14 -08:00
Jason Kulatunga
e360369706
begin restoring Sqlite functionality. ( #11 )
2022-12-02 19:40:58 -08:00
Jason Kulatunga
c79dc02a1d
cleanup unnecessary constants.
...
adding anthem sourcetypes.
2022-11-08 19:45:05 -08:00
Jason Kulatunga
bcb3f58d6e
get full name information, make sure its displayed in the UI.
...
added a white on transparent banner image.
2022-11-03 22:24:30 -07:00
Jason Kulatunga
032946100c
working backend changes to generate JWT tokens during signin and signup. ( #9 )
2022-11-02 00:12:54 -07:00
Jason Kulatunga
f0f37cd738
adding a new configuration for "cloud_sandbox" - used for AWS bucket.
...
consistent couchdb creds.
removed metadata endpoint and config.
ensure that the couchdb endpoint can be relative or absolute url. added tests for relative vs abs urls.
2022-10-28 19:01:20 -07:00
Jason Kulatunga
947586c71d
fixing genreated mock database.
...
fixing time on toasts.
2022-10-12 19:01:43 -07:00
Jason Kulatunga
4f90a9eedb
provide a consistent way to retrun results from WebWorkers.
...
fixed Username field in login page.
added support for CORS relay
fixed spec files.
2022-10-12 18:47:12 -07:00
Jason Kulatunga
d89cb920af
remove web.jwt.encryptionkey requirement
...
when running just CouchDB, make sure fasten services are not present.
added auth interceptor when session has expired.
2022-10-09 12:59:09 -07:00
Jason Kulatunga
8f933e626d
cleanup config files and messages.
2022-10-09 12:30:26 -07:00
Jason Kulatunga
a7daae9047
working couchdb reverse proxy behind webapp binary.
2022-10-09 09:34:57 -07:00
Jason Kulatunga
f2bb44e8be
refactor backend to remove all storage logic. Just auth and metadata endpoints now.
...
Adding docker image for couchdb and addign docker-compose file.
2022-10-08 19:40:33 -07:00
Jason Kulatunga
349b627845
remove the CreateSource endpoint from backend api.
2022-10-06 17:57:31 -07:00
Jason Kulatunga
bca11bdf87
adding test for logica.
2022-09-26 20:50:34 -07:00
Jason Kulatunga
631bb9bdcd
fixing db path in tests.
2022-09-26 19:50:00 -07:00
Jason Kulatunga
d765b03808
added ci.
2022-09-26 18:42:33 -07:00
Jason Kulatunga
61ed115dae
fixing breadcrumbs
...
make sure patient is sent with SourceSummary.
2022-09-25 18:35:36 -07:00
Jason Kulatunga
cd6a0fb68f
working getResourceBySourceId query and api.
2022-09-25 16:57:30 -07:00
Jason Kulatunga
581d008f09
fix CareEvolution (now configured as a Confidential client)
...
fixes fastenhealth/docs#10
2022-09-25 16:13:06 -07:00
Jason Kulatunga
61d16cfb55
fixed error where the source ID was not populated whne source is first created, causing next SyncAll command to have invalid source_id values.
...
Created default SyncAll function (using $everything) and SyncAllByResourceName which can be used as a fallback.
cleaned up DB layer , dont use Model unless Gorm cannot figure out the table. Use pointers consistently.
When syncing resources, store errors in a map, so that all resources get synced before returing errors
2022-09-24 22:18:07 -07:00
Jason Kulatunga
8531a028c9
move sync logic to base FHIR401 class.
2022-09-24 19:30:46 -07:00
Jason Kulatunga
6b5ef7f71e
for confidential sources, provide way to pass patient_id back to frontend.
...
When GetRequest fails, print the body (may have helpful messages)
Make sure we can set the headers used by the GetRequest method per Source (BlueButton doesnt work with application/json+fhir header)
Added BlueButton Client, WIP
2022-09-24 16:46:15 -07:00
Jason Kulatunga
5f2f99a202
handle authorize claim for confidential sources.
...
update BlueButton image to use Medicare logo.
2022-09-24 14:19:25 -07:00
Jason Kulatunga
4afbd6f834
fixing Athena client.
...
fixing popup for re-sync.
2022-09-23 23:21:57 -07:00
Jason Kulatunga
564fee9e90
added athena health client.
...
fixed header.
added a logout/signout function.
2022-09-23 22:42:01 -07:00
Jason Kulatunga
270abdc7af
adding a generalpurpose GetResourceBundle method.
...
adding tests for cerner.
2022-09-22 22:32:20 -07:00
Jason Kulatunga
734dac28f6
fix oauth token refresh.
...
make sure raw request query params are passed in.
2022-09-21 22:02:55 -07:00
Jason Kulatunga
38dbc465bf
added test recordings for logicahealth
2022-09-21 21:23:38 -07:00
Jason Kulatunga
356838fd97
working pagination.
...
added test recordings for logicahealth
2022-09-21 21:08:21 -07:00
Jason Kulatunga
fa09bfafd6
adding docker image.
...
adding cerner client.
adding new images
using yarn for npm package management.
2022-09-21 18:57:38 -07:00
Jason Kulatunga
342cfa740b
marketing updates.
...
make sure the oauth endpoints are configurable.
2022-09-19 20:21:22 -07:00
Jason Kulatunga
080379eabe
adding more services.
2022-09-18 19:46:57 -07:00
Jason Kulatunga
cc485a0615
support logica service.
...
update dashboard.
moved RAW API endpoint outside of the secure block.
2022-09-18 00:36:53 -07:00
Jason Kulatunga
02dcbcc507
working summary api
2022-09-17 10:14:59 -07:00
Jason Kulatunga
7bced71569
adding source summary endpoint
...
added generic resource list component
added resource-list outlet directive and component.
2022-09-17 00:12:12 -07:00
Jason Kulatunga
5f71891970
adding support for dropzone
...
adding support for manual source
2022-09-15 22:26:37 -07:00
Jason Kulatunga
11605aae93
added a getResources and ListResourceFhir API endpoint
2022-09-14 21:56:32 -07:00
Jason Kulatunga
5ae77a0459
adding sourceDetail component.
...
make sure we 404 if an api endpoint doesn't exist.
2022-09-14 19:59:16 -07:00
Jason Kulatunga
f845ae3716
make sure we wait for the token to be stored before reloading the page.
2022-09-14 08:19:28 -07:00
Jason Kulatunga
edd8587ab2
make sure that the jwt encryption key is configurable by the end user.
2022-09-13 21:41:10 -04:00
Jason Kulatunga
129d728d34
consistently use source_type / sourceType instead of provider_id providerId.
...
using LighthouseService instead of PassportService.
2022-09-13 21:15:18 -04:00
Jason Kulatunga
360af5adee
renamed usages of providerId to sourceType
2022-09-13 21:02:26 -04:00
Jason Kulatunga
1535f139c1
when making requests to the db, use the current user context.
2022-09-12 21:20:56 -04:00
Jason Kulatunga
87db3cf751
better error messages.
2022-09-12 17:34:03 -04:00
Jason Kulatunga
d67650eaf1
make sure we parse the auth header.
...
make sure the token signing method is one we expect.
2022-09-12 01:03:20 -04:00
Jason Kulatunga
6aa92674bc
working authentication check (via token presence in localstorage).
...
HTTP interceptor to always add token to header.
2022-09-12 00:58:19 -04:00
Jason Kulatunga
1a3dce77cb
adding form validation on signup.
...
adding auth/signin and auth/signup api endpoints.
2022-09-11 23:59:13 -04:00
Jason Kulatunga
aefe96c71e
added a details page (unwired)
...
fixed logo
print more error messages.
added aetna client.
2022-09-10 23:12:29 -04:00
Jason Kulatunga
e24ff1b8f6
fixing fonts.
...
tweaking dashboard UI
fixing medical sources component to be dynamically generated via list.
2022-09-10 14:59:13 -04:00
Jason Kulatunga
68eb18e64b
update expired access token automatically (using refreshtoken). if updatedSource is returned from client, it must be stored in the DB.
2022-09-08 23:51:46 -07:00
Jason Kulatunga
187d72b085
added mechanism to query resources stored in DB.
...
Adding raw lookup from source.
2022-09-08 22:53:54 -07:00
Jason Kulatunga
c9fc23e3a9
sync all resources on completion.
2022-09-08 21:14:03 -07:00
Jason Kulatunga
96465f23df
adding test framework/recordings for client.
...
Adding generic upsert fuction for models.
2022-09-01 18:54:01 -07:00
Jason Kulatunga
caa7315ad9
adding tests.
...
fixing go generate
updating FHIR models to version with comments.
2022-08-31 19:06:12 -07:00
Jason Kulatunga
79755d8e8b
fixing composite unique index (when embedded the index is not unique).
...
creating a lookup table for retrieving Resource references (and generated UUIDs).
Adding organization processing.
2022-08-30 21:36:40 -07:00
Jason Kulatunga
9902daa75d
make sure null is handled correctly.
2022-08-30 20:24:37 -07:00
Jason Kulatunga
05b13677a6
working serialization, storage in DB.
2022-08-30 19:55:27 -07:00
Jason Kulatunga
4c0d3c831d
working on Gorm Serialization of structs.
2022-08-30 19:35:01 -07:00
Jason Kulatunga
c8441086c8
added ModelBase and OriginBase which can be used as base classes for Gorm Models.
...
Updated BaseClient - use Source vs ProviderCredentials terminolgy.
Updated CignaClient
Added a raw request api endpoint which can
2022-08-30 19:03:24 -07:00
Jason Kulatunga
e6944cb4ee
reorganzing functions.
2022-08-28 21:32:13 -07:00
Jason Kulatunga
fa714d6bff
working hub with versioned fhir clients.
2022-08-28 19:09:39 -07:00
Jason Kulatunga
7a9fdfd1b9
working on Hub for retreiving data from Health Providers.
2022-08-28 10:51:58 -07:00
Jason Kulatunga
93f04802fe
working. list provider credentials.
2022-08-27 19:34:48 -07:00
Jason Kulatunga
cf24362806
working, on provider credential create, return created object.
2022-08-27 08:39:55 -07:00
Jason Kulatunga
cc9c1277e0
when adding new medical provider, disable the button.
...
Add primary key constraint to th eProviderCredential.
Add ForeignKey/association to the ProviderCredntial.
2022-08-27 08:17:09 -07:00
Jason Kulatunga
41e60cd7d6
working frontend, after token swap store credential in SQLite db.
2022-08-25 21:57:29 -07:00
Jason Kulatunga
e657d73e0e
working frontend. adding database.
2022-08-25 18:26:29 -07:00
Jason Kulatunga
33390680c6
rename
2022-08-22 18:28:59 -07:00
Jason Kulatunga
d46f12928e
rename
2022-08-22 18:11:00 -07:00
Jason Kulatunga
cc9948cd04
Initial commit
2022-08-22 17:51:46 -07:00