1021 lines
44 KiB
Go
1021 lines
44 KiB
Go
// THIS FILE IS GENERATED BY https://github.com/fastenhealth/fasten-onprem/blob/main/backend/pkg/models/database/generate.go
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// PLEASE DO NOT EDIT BY HAND
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package database
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import (
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"encoding/json"
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"fmt"
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goja "github.com/dop251/goja"
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models "github.com/fastenhealth/fastenhealth-onprem/backend/pkg/models"
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datatypes "gorm.io/datatypes"
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"time"
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)
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type FhirObservation struct {
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models.ResourceBase
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// Reference to the service request.
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// https://hl7.org/fhir/r4/search.html#reference
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BasedOn datatypes.JSON `gorm:"column:basedOn;type:text;serializer:json" json:"basedOn,omitempty"`
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// The classification of the type of observation
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// https://hl7.org/fhir/r4/search.html#token
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Category datatypes.JSON `gorm:"column:category;type:text;serializer:json" json:"category,omitempty"`
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/*
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Multiple Resources:
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* [AllergyIntolerance](allergyintolerance.html): Code that identifies the allergy or intolerance
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* [Condition](condition.html): Code for the condition
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* [DeviceRequest](devicerequest.html): Code for what is being requested/ordered
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* [DiagnosticReport](diagnosticreport.html): The code for the report, as opposed to codes for the atomic results, which are the names on the observation resource referred to from the result
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* [FamilyMemberHistory](familymemberhistory.html): A search by a condition code
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* [List](list.html): What the purpose of this list is
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* [Medication](medication.html): Returns medications for a specific code
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* [MedicationAdministration](medicationadministration.html): Return administrations of this medication code
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* [MedicationDispense](medicationdispense.html): Returns dispenses of this medicine code
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* [MedicationRequest](medicationrequest.html): Return prescriptions of this medication code
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* [MedicationStatement](medicationstatement.html): Return statements of this medication code
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* [Observation](observation.html): The code of the observation type
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* [Procedure](procedure.html): A code to identify a procedure
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* [ServiceRequest](servicerequest.html): What is being requested/ordered
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*/
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// https://hl7.org/fhir/r4/search.html#token
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Code datatypes.JSON `gorm:"column:code;type:text;serializer:json" json:"code,omitempty"`
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// The code of the observation type or component type
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// https://hl7.org/fhir/r4/search.html#token
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ComboCode datatypes.JSON `gorm:"column:comboCode;type:text;serializer:json" json:"comboCode,omitempty"`
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// The reason why the expected value in the element Observation.value[x] or Observation.component.value[x] is missing.
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// https://hl7.org/fhir/r4/search.html#token
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ComboDataAbsentReason datatypes.JSON `gorm:"column:comboDataAbsentReason;type:text;serializer:json" json:"comboDataAbsentReason,omitempty"`
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// The value or component value of the observation, if the value is a CodeableConcept
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// https://hl7.org/fhir/r4/search.html#token
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ComboValueConcept datatypes.JSON `gorm:"column:comboValueConcept;type:text;serializer:json" json:"comboValueConcept,omitempty"`
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// The value or component value of the observation, if the value is a Quantity, or a SampledData (just search on the bounds of the values in sampled data)
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// https://hl7.org/fhir/r4/search.html#quantity
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ComboValueQuantity datatypes.JSON `gorm:"column:comboValueQuantity;type:text;serializer:json" json:"comboValueQuantity,omitempty"`
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// The component code of the observation type
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// https://hl7.org/fhir/r4/search.html#token
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ComponentCode datatypes.JSON `gorm:"column:componentCode;type:text;serializer:json" json:"componentCode,omitempty"`
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// The reason why the expected value in the element Observation.component.value[x] is missing.
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// https://hl7.org/fhir/r4/search.html#token
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ComponentDataAbsentReason datatypes.JSON `gorm:"column:componentDataAbsentReason;type:text;serializer:json" json:"componentDataAbsentReason,omitempty"`
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// The value of the component observation, if the value is a CodeableConcept
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// https://hl7.org/fhir/r4/search.html#token
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ComponentValueConcept datatypes.JSON `gorm:"column:componentValueConcept;type:text;serializer:json" json:"componentValueConcept,omitempty"`
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// The value of the component observation, if the value is a Quantity, or a SampledData (just search on the bounds of the values in sampled data)
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// https://hl7.org/fhir/r4/search.html#quantity
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ComponentValueQuantity datatypes.JSON `gorm:"column:componentValueQuantity;type:text;serializer:json" json:"componentValueQuantity,omitempty"`
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// The reason why the expected value in the element Observation.value[x] is missing.
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// https://hl7.org/fhir/r4/search.html#token
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DataAbsentReason datatypes.JSON `gorm:"column:dataAbsentReason;type:text;serializer:json" json:"dataAbsentReason,omitempty"`
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/*
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Multiple Resources:
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* [AllergyIntolerance](allergyintolerance.html): Date first version of the resource instance was recorded
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* [CarePlan](careplan.html): Time period plan covers
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* [CareTeam](careteam.html): Time period team covers
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* [ClinicalImpression](clinicalimpression.html): When the assessment was documented
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* [Composition](composition.html): Composition editing time
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* [Consent](consent.html): When this Consent was created or indexed
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* [DiagnosticReport](diagnosticreport.html): The clinically relevant time of the report
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* [Encounter](encounter.html): A date within the period the Encounter lasted
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* [EpisodeOfCare](episodeofcare.html): The provided date search value falls within the episode of care's period
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* [FamilyMemberHistory](familymemberhistory.html): When history was recorded or last updated
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* [Flag](flag.html): Time period when flag is active
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* [Immunization](immunization.html): Vaccination (non)-Administration Date
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* [List](list.html): When the list was prepared
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* [Observation](observation.html): Obtained date/time. If the obtained element is a period, a date that falls in the period
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* [Procedure](procedure.html): When the procedure was performed
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* [RiskAssessment](riskassessment.html): When was assessment made?
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* [SupplyRequest](supplyrequest.html): When the request was made
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*/
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// https://hl7.org/fhir/r4/search.html#date
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Date time.Time `gorm:"column:date;type:datetime" json:"date,omitempty"`
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// Related measurements the observation is made from
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// https://hl7.org/fhir/r4/search.html#reference
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DerivedFrom datatypes.JSON `gorm:"column:derivedFrom;type:text;serializer:json" json:"derivedFrom,omitempty"`
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// The Device that generated the observation data.
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// https://hl7.org/fhir/r4/search.html#reference
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Device datatypes.JSON `gorm:"column:device;type:text;serializer:json" json:"device,omitempty"`
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/*
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Multiple Resources:
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* [Composition](composition.html): Context of the Composition
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* [DeviceRequest](devicerequest.html): Encounter during which request was created
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* [DiagnosticReport](diagnosticreport.html): The Encounter when the order was made
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* [DocumentReference](documentreference.html): Context of the document content
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* [Flag](flag.html): Alert relevant during encounter
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* [List](list.html): Context in which list created
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* [NutritionOrder](nutritionorder.html): Return nutrition orders with this encounter identifier
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* [Observation](observation.html): Encounter related to the observation
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* [Procedure](procedure.html): Encounter created as part of
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* [RiskAssessment](riskassessment.html): Where was assessment performed?
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* [ServiceRequest](servicerequest.html): An encounter in which this request is made
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* [VisionPrescription](visionprescription.html): Return prescriptions with this encounter identifier
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*/
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// https://hl7.org/fhir/r4/search.html#reference
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Encounter datatypes.JSON `gorm:"column:encounter;type:text;serializer:json" json:"encounter,omitempty"`
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// The focus of an observation when the focus is not the patient of record.
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// https://hl7.org/fhir/r4/search.html#reference
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Focus datatypes.JSON `gorm:"column:focus;type:text;serializer:json" json:"focus,omitempty"`
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// Related resource that belongs to the Observation group
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// https://hl7.org/fhir/r4/search.html#reference
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HasMember datatypes.JSON `gorm:"column:hasMember;type:text;serializer:json" json:"hasMember,omitempty"`
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/*
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Multiple Resources:
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* [AllergyIntolerance](allergyintolerance.html): External ids for this item
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* [CarePlan](careplan.html): External Ids for this plan
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* [CareTeam](careteam.html): External Ids for this team
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* [Composition](composition.html): Version-independent identifier for the Composition
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* [Condition](condition.html): A unique identifier of the condition record
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* [Consent](consent.html): Identifier for this record (external references)
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* [DetectedIssue](detectedissue.html): Unique id for the detected issue
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* [DeviceRequest](devicerequest.html): Business identifier for request/order
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* [DiagnosticReport](diagnosticreport.html): An identifier for the report
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* [DocumentManifest](documentmanifest.html): Unique Identifier for the set of documents
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* [DocumentReference](documentreference.html): Master Version Specific Identifier
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* [Encounter](encounter.html): Identifier(s) by which this encounter is known
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* [EpisodeOfCare](episodeofcare.html): Business Identifier(s) relevant for this EpisodeOfCare
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* [FamilyMemberHistory](familymemberhistory.html): A search by a record identifier
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* [Goal](goal.html): External Ids for this goal
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* [ImagingStudy](imagingstudy.html): Identifiers for the Study, such as DICOM Study Instance UID and Accession number
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* [Immunization](immunization.html): Business identifier
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* [List](list.html): Business identifier
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* [MedicationAdministration](medicationadministration.html): Return administrations with this external identifier
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* [MedicationDispense](medicationdispense.html): Returns dispenses with this external identifier
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* [MedicationRequest](medicationrequest.html): Return prescriptions with this external identifier
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* [MedicationStatement](medicationstatement.html): Return statements with this external identifier
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* [NutritionOrder](nutritionorder.html): Return nutrition orders with this external identifier
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* [Observation](observation.html): The unique id for a particular observation
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* [Procedure](procedure.html): A unique identifier for a procedure
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* [RiskAssessment](riskassessment.html): Unique identifier for the assessment
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* [ServiceRequest](servicerequest.html): Identifiers assigned to this order
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* [SupplyDelivery](supplydelivery.html): External identifier
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* [SupplyRequest](supplyrequest.html): Business Identifier for SupplyRequest
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* [VisionPrescription](visionprescription.html): Return prescriptions with this external identifier
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*/
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// https://hl7.org/fhir/r4/search.html#token
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Identifier datatypes.JSON `gorm:"column:identifier;type:text;serializer:json" json:"identifier,omitempty"`
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// Language of the resource content
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// https://hl7.org/fhir/r4/search.html#token
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Language datatypes.JSON `gorm:"column:language;type:text;serializer:json" json:"language,omitempty"`
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// When the resource version last changed
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// https://hl7.org/fhir/r4/search.html#date
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LastUpdated time.Time `gorm:"column:lastUpdated;type:datetime" json:"lastUpdated,omitempty"`
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// The method used for the observation
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// https://hl7.org/fhir/r4/search.html#token
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Method datatypes.JSON `gorm:"column:method;type:text;serializer:json" json:"method,omitempty"`
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// Part of referenced event
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// https://hl7.org/fhir/r4/search.html#reference
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PartOf datatypes.JSON `gorm:"column:partOf;type:text;serializer:json" json:"partOf,omitempty"`
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// Who performed the observation
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// https://hl7.org/fhir/r4/search.html#reference
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Performer datatypes.JSON `gorm:"column:performer;type:text;serializer:json" json:"performer,omitempty"`
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// Profiles this resource claims to conform to
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// https://hl7.org/fhir/r4/search.html#reference
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Profile datatypes.JSON `gorm:"column:profile;type:text;serializer:json" json:"profile,omitempty"`
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// Identifies where the resource comes from
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// https://hl7.org/fhir/r4/search.html#uri
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SourceUri string `gorm:"column:sourceUri;type:text" json:"sourceUri,omitempty"`
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// Specimen used for this observation
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// https://hl7.org/fhir/r4/search.html#reference
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Specimen datatypes.JSON `gorm:"column:specimen;type:text;serializer:json" json:"specimen,omitempty"`
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// The status of the observation
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// https://hl7.org/fhir/r4/search.html#token
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Status datatypes.JSON `gorm:"column:status;type:text;serializer:json" json:"status,omitempty"`
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// The subject that the observation is about
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// https://hl7.org/fhir/r4/search.html#reference
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Subject datatypes.JSON `gorm:"column:subject;type:text;serializer:json" json:"subject,omitempty"`
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// Tags applied to this resource
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// https://hl7.org/fhir/r4/search.html#token
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Tag datatypes.JSON `gorm:"column:tag;type:text;serializer:json" json:"tag,omitempty"`
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// Text search against the narrative
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// https://hl7.org/fhir/r4/search.html#string
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Text string `gorm:"column:text;type:text" json:"text,omitempty"`
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// A resource type filter
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// https://hl7.org/fhir/r4/search.html#special
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Type datatypes.JSON `gorm:"column:type;type:text;serializer:json" json:"type,omitempty"`
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// The value of the observation, if the value is a CodeableConcept
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// https://hl7.org/fhir/r4/search.html#token
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ValueConcept datatypes.JSON `gorm:"column:valueConcept;type:text;serializer:json" json:"valueConcept,omitempty"`
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// The value of the observation, if the value is a date or period of time
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// https://hl7.org/fhir/r4/search.html#date
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ValueDate time.Time `gorm:"column:valueDate;type:datetime" json:"valueDate,omitempty"`
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// The value of the observation, if the value is a Quantity, or a SampledData (just search on the bounds of the values in sampled data)
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// https://hl7.org/fhir/r4/search.html#quantity
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ValueQuantity datatypes.JSON `gorm:"column:valueQuantity;type:text;serializer:json" json:"valueQuantity,omitempty"`
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// The value of the observation, if the value is a string, and also searches in CodeableConcept.text
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// https://hl7.org/fhir/r4/search.html#string
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ValueString string `gorm:"column:valueString;type:text" json:"valueString,omitempty"`
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}
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func (s *FhirObservation) GetSearchParameters() map[string]string {
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searchParameters := map[string]string{
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"basedOn": "reference",
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"category": "token",
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"code": "token",
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"comboCode": "token",
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"comboDataAbsentReason": "token",
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"comboValueConcept": "token",
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"comboValueQuantity": "quantity",
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"componentCode": "token",
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"componentDataAbsentReason": "token",
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"componentValueConcept": "token",
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"componentValueQuantity": "quantity",
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"dataAbsentReason": "token",
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"date": "date",
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"derivedFrom": "reference",
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"device": "reference",
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"encounter": "reference",
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"focus": "reference",
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"hasMember": "reference",
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"identifier": "token",
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"language": "token",
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"lastUpdated": "date",
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"method": "token",
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"partOf": "reference",
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"performer": "reference",
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"profile": "reference",
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"sourceUri": "uri",
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"specimen": "reference",
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"status": "token",
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"subject": "reference",
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"tag": "token",
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"text": "string",
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"type": "special",
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"valueConcept": "token",
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"valueDate": "date",
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"valueQuantity": "quantity",
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"valueString": "string",
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}
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return searchParameters
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}
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func (s *FhirObservation) PopulateAndExtractSearchParameters(resourceRaw json.RawMessage) error {
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s.ResourceRaw = datatypes.JSON(resourceRaw)
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// unmarshal the raw resource (bytes) into a map
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var resourceRawMap map[string]interface{}
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err := json.Unmarshal(resourceRaw, &resourceRawMap)
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if err != nil {
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return err
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}
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if len(fhirPathJs) == 0 {
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return fmt.Errorf("fhirPathJs script is empty")
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}
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vm := goja.New()
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// setup the global window object
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vm.Set("window", vm.NewObject())
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// set the global FHIR Resource object
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vm.Set("fhirResource", resourceRawMap)
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// compile the fhirpath library
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fhirPathJsProgram, err := goja.Compile("fhirpath.min.js", fhirPathJs, true)
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if err != nil {
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return err
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}
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// add the fhirpath library in the goja vm
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_, err = vm.RunProgram(fhirPathJsProgram)
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if err != nil {
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return err
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}
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// execute the fhirpath expression for each search parameter
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// extracting BasedOn
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basedOnResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.basedOn'))")
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if err == nil && basedOnResult.String() != "undefined" {
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s.BasedOn = []byte(basedOnResult.String())
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}
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// extracting Category
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categoryResult, err := vm.RunString(`
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CategoryResult = window.fhirpath.evaluate(fhirResource, 'Observation.category')
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CategoryProcessed = CategoryResult.reduce((accumulator, currentValue) => {
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if (currentValue.coding) {
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//CodeableConcept
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currentValue.coding.map((coding) => {
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accumulator.push({
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"code": coding.code,
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"system": coding.system,
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"text": currentValue.text
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})
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})
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} else if (currentValue.value) {
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//ContactPoint, Identifier
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accumulator.push({
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"code": currentValue.value,
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"system": currentValue.system,
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"text": currentValue.type?.text
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})
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} else if (currentValue.code) {
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//Coding
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accumulator.push({
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"code": currentValue.code,
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"system": currentValue.system,
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"text": currentValue.display
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})
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} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
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//string, boolean
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accumulator.push({
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"code": currentValue,
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})
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}
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return accumulator
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}, [])
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JSON.stringify(CategoryProcessed)
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`)
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if err == nil && categoryResult.String() != "undefined" {
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s.Category = []byte(categoryResult.String())
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}
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// extracting Code
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codeResult, err := vm.RunString(`
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CodeResult = window.fhirpath.evaluate(fhirResource, 'AllergyIntolerance.code | AllergyIntolerance.reaction.substance | Condition.code | (DeviceRequest.codeCodeableConcept) | DiagnosticReport.code | FamilyMemberHistory.condition.code | List.code | Medication.code | (MedicationAdministration.medicationCodeableConcept) | (MedicationDispense.medicationCodeableConcept) | (MedicationRequest.medicationCodeableConcept) | (MedicationStatement.medicationCodeableConcept) | Observation.code | Procedure.code | ServiceRequest.code')
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CodeProcessed = CodeResult.reduce((accumulator, currentValue) => {
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if (currentValue.coding) {
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//CodeableConcept
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currentValue.coding.map((coding) => {
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accumulator.push({
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"code": coding.code,
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"system": coding.system,
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"text": currentValue.text
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})
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})
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} else if (currentValue.value) {
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//ContactPoint, Identifier
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accumulator.push({
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"code": currentValue.value,
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"system": currentValue.system,
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"text": currentValue.type?.text
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})
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} else if (currentValue.code) {
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//Coding
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accumulator.push({
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"code": currentValue.code,
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"system": currentValue.system,
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"text": currentValue.display
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})
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} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
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//string, boolean
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accumulator.push({
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"code": currentValue,
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})
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}
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return accumulator
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}, [])
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JSON.stringify(CodeProcessed)
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`)
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if err == nil && codeResult.String() != "undefined" {
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s.Code = []byte(codeResult.String())
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}
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// extracting ComboCode
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comboCodeResult, err := vm.RunString(`
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ComboCodeResult = window.fhirpath.evaluate(fhirResource, 'Observation.code | Observation.component.code')
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ComboCodeProcessed = ComboCodeResult.reduce((accumulator, currentValue) => {
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if (currentValue.coding) {
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//CodeableConcept
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currentValue.coding.map((coding) => {
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accumulator.push({
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"code": coding.code,
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"system": coding.system,
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"text": currentValue.text
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})
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})
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} else if (currentValue.value) {
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//ContactPoint, Identifier
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accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(ComboCodeProcessed)
|
|
`)
|
|
if err == nil && comboCodeResult.String() != "undefined" {
|
|
s.ComboCode = []byte(comboCodeResult.String())
|
|
}
|
|
// extracting ComboDataAbsentReason
|
|
comboDataAbsentReasonResult, err := vm.RunString(`
|
|
ComboDataAbsentReasonResult = window.fhirpath.evaluate(fhirResource, 'Observation.dataAbsentReason | Observation.component.dataAbsentReason')
|
|
ComboDataAbsentReasonProcessed = ComboDataAbsentReasonResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(ComboDataAbsentReasonProcessed)
|
|
`)
|
|
if err == nil && comboDataAbsentReasonResult.String() != "undefined" {
|
|
s.ComboDataAbsentReason = []byte(comboDataAbsentReasonResult.String())
|
|
}
|
|
// extracting ComboValueConcept
|
|
comboValueConceptResult, err := vm.RunString(`
|
|
ComboValueConceptResult = window.fhirpath.evaluate(fhirResource, '(Observation.valueCodeableConcept) | (Observation.component.valueCodeableConcept)')
|
|
ComboValueConceptProcessed = ComboValueConceptResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(ComboValueConceptProcessed)
|
|
`)
|
|
if err == nil && comboValueConceptResult.String() != "undefined" {
|
|
s.ComboValueConcept = []byte(comboValueConceptResult.String())
|
|
}
|
|
// extracting ComboValueQuantity
|
|
comboValueQuantityResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, '(Observation.valueQuantity) | (Observation.valueSampledData) | (Observation.component.valueQuantity) | (Observation.component.valueSampledData)'))")
|
|
if err == nil && comboValueQuantityResult.String() != "undefined" {
|
|
s.ComboValueQuantity = []byte(comboValueQuantityResult.String())
|
|
}
|
|
// extracting ComponentCode
|
|
componentCodeResult, err := vm.RunString(`
|
|
ComponentCodeResult = window.fhirpath.evaluate(fhirResource, 'Observation.component.code')
|
|
ComponentCodeProcessed = ComponentCodeResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(ComponentCodeProcessed)
|
|
`)
|
|
if err == nil && componentCodeResult.String() != "undefined" {
|
|
s.ComponentCode = []byte(componentCodeResult.String())
|
|
}
|
|
// extracting ComponentDataAbsentReason
|
|
componentDataAbsentReasonResult, err := vm.RunString(`
|
|
ComponentDataAbsentReasonResult = window.fhirpath.evaluate(fhirResource, 'Observation.component.dataAbsentReason')
|
|
ComponentDataAbsentReasonProcessed = ComponentDataAbsentReasonResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(ComponentDataAbsentReasonProcessed)
|
|
`)
|
|
if err == nil && componentDataAbsentReasonResult.String() != "undefined" {
|
|
s.ComponentDataAbsentReason = []byte(componentDataAbsentReasonResult.String())
|
|
}
|
|
// extracting ComponentValueConcept
|
|
componentValueConceptResult, err := vm.RunString(`
|
|
ComponentValueConceptResult = window.fhirpath.evaluate(fhirResource, '(Observation.component.valueCodeableConcept)')
|
|
ComponentValueConceptProcessed = ComponentValueConceptResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(ComponentValueConceptProcessed)
|
|
`)
|
|
if err == nil && componentValueConceptResult.String() != "undefined" {
|
|
s.ComponentValueConcept = []byte(componentValueConceptResult.String())
|
|
}
|
|
// extracting ComponentValueQuantity
|
|
componentValueQuantityResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, '(Observation.component.valueQuantity) | (Observation.component.valueSampledData)'))")
|
|
if err == nil && componentValueQuantityResult.String() != "undefined" {
|
|
s.ComponentValueQuantity = []byte(componentValueQuantityResult.String())
|
|
}
|
|
// extracting DataAbsentReason
|
|
dataAbsentReasonResult, err := vm.RunString(`
|
|
DataAbsentReasonResult = window.fhirpath.evaluate(fhirResource, 'Observation.dataAbsentReason')
|
|
DataAbsentReasonProcessed = DataAbsentReasonResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(DataAbsentReasonProcessed)
|
|
`)
|
|
if err == nil && dataAbsentReasonResult.String() != "undefined" {
|
|
s.DataAbsentReason = []byte(dataAbsentReasonResult.String())
|
|
}
|
|
// extracting Date
|
|
dateResult, err := vm.RunString("window.fhirpath.evaluate(fhirResource, 'AllergyIntolerance.recordedDate | CarePlan.period | CareTeam.period | ClinicalImpression.date | Composition.date | Consent.dateTime | DiagnosticReport.effective | Encounter.period | EpisodeOfCare.period | FamilyMemberHistory.date | Flag.period | (Immunization.occurrenceDateTime) | List.date | Observation.effective | Procedure.performed | (RiskAssessment.occurrenceDateTime) | SupplyRequest.authoredOn')[0]")
|
|
if err == nil && dateResult.String() != "undefined" {
|
|
t, err := time.Parse(time.RFC3339, dateResult.String())
|
|
if err == nil {
|
|
s.Date = t
|
|
}
|
|
}
|
|
// extracting DerivedFrom
|
|
derivedFromResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.derivedFrom'))")
|
|
if err == nil && derivedFromResult.String() != "undefined" {
|
|
s.DerivedFrom = []byte(derivedFromResult.String())
|
|
}
|
|
// extracting Device
|
|
deviceResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.device'))")
|
|
if err == nil && deviceResult.String() != "undefined" {
|
|
s.Device = []byte(deviceResult.String())
|
|
}
|
|
// extracting Encounter
|
|
encounterResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Composition.encounter | DeviceRequest.encounter | DiagnosticReport.encounter | DocumentReference.context.encounter.where(resolve() is Encounter) | Flag.encounter | List.encounter | NutritionOrder.encounter | Observation.encounter | Procedure.encounter | RiskAssessment.encounter | ServiceRequest.encounter | VisionPrescription.encounter'))")
|
|
if err == nil && encounterResult.String() != "undefined" {
|
|
s.Encounter = []byte(encounterResult.String())
|
|
}
|
|
// extracting Focus
|
|
focusResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.focus'))")
|
|
if err == nil && focusResult.String() != "undefined" {
|
|
s.Focus = []byte(focusResult.String())
|
|
}
|
|
// extracting HasMember
|
|
hasMemberResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.hasMember'))")
|
|
if err == nil && hasMemberResult.String() != "undefined" {
|
|
s.HasMember = []byte(hasMemberResult.String())
|
|
}
|
|
// extracting Identifier
|
|
identifierResult, err := vm.RunString(`
|
|
IdentifierResult = window.fhirpath.evaluate(fhirResource, 'AllergyIntolerance.identifier | CarePlan.identifier | CareTeam.identifier | Composition.identifier | Condition.identifier | Consent.identifier | DetectedIssue.identifier | DeviceRequest.identifier | DiagnosticReport.identifier | DocumentManifest.masterIdentifier | DocumentManifest.identifier | DocumentReference.masterIdentifier | DocumentReference.identifier | Encounter.identifier | EpisodeOfCare.identifier | FamilyMemberHistory.identifier | Goal.identifier | ImagingStudy.identifier | Immunization.identifier | List.identifier | MedicationAdministration.identifier | MedicationDispense.identifier | MedicationRequest.identifier | MedicationStatement.identifier | NutritionOrder.identifier | Observation.identifier | Procedure.identifier | RiskAssessment.identifier | ServiceRequest.identifier | SupplyDelivery.identifier | SupplyRequest.identifier | VisionPrescription.identifier')
|
|
IdentifierProcessed = IdentifierResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(IdentifierProcessed)
|
|
`)
|
|
if err == nil && identifierResult.String() != "undefined" {
|
|
s.Identifier = []byte(identifierResult.String())
|
|
}
|
|
// extracting Language
|
|
languageResult, err := vm.RunString(`
|
|
LanguageResult = window.fhirpath.evaluate(fhirResource, 'Resource.language')
|
|
LanguageProcessed = LanguageResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(LanguageProcessed)
|
|
`)
|
|
if err == nil && languageResult.String() != "undefined" {
|
|
s.Language = []byte(languageResult.String())
|
|
}
|
|
// extracting LastUpdated
|
|
lastUpdatedResult, err := vm.RunString("window.fhirpath.evaluate(fhirResource, 'Resource.meta.lastUpdated')[0]")
|
|
if err == nil && lastUpdatedResult.String() != "undefined" {
|
|
t, err := time.Parse(time.RFC3339, lastUpdatedResult.String())
|
|
if err == nil {
|
|
s.LastUpdated = t
|
|
}
|
|
}
|
|
// extracting Method
|
|
methodResult, err := vm.RunString(`
|
|
MethodResult = window.fhirpath.evaluate(fhirResource, 'Observation.method')
|
|
MethodProcessed = MethodResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(MethodProcessed)
|
|
`)
|
|
if err == nil && methodResult.String() != "undefined" {
|
|
s.Method = []byte(methodResult.String())
|
|
}
|
|
// extracting PartOf
|
|
partOfResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.partOf'))")
|
|
if err == nil && partOfResult.String() != "undefined" {
|
|
s.PartOf = []byte(partOfResult.String())
|
|
}
|
|
// extracting Performer
|
|
performerResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.performer'))")
|
|
if err == nil && performerResult.String() != "undefined" {
|
|
s.Performer = []byte(performerResult.String())
|
|
}
|
|
// extracting Profile
|
|
profileResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Resource.meta.profile'))")
|
|
if err == nil && profileResult.String() != "undefined" {
|
|
s.Profile = []byte(profileResult.String())
|
|
}
|
|
// extracting SourceUri
|
|
sourceUriResult, err := vm.RunString("window.fhirpath.evaluate(fhirResource, 'Resource.meta.source')[0]")
|
|
if err == nil && sourceUriResult.String() != "undefined" {
|
|
s.SourceUri = sourceUriResult.String()
|
|
}
|
|
// extracting Specimen
|
|
specimenResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.specimen'))")
|
|
if err == nil && specimenResult.String() != "undefined" {
|
|
s.Specimen = []byte(specimenResult.String())
|
|
}
|
|
// extracting Status
|
|
statusResult, err := vm.RunString(`
|
|
StatusResult = window.fhirpath.evaluate(fhirResource, 'Observation.status')
|
|
StatusProcessed = StatusResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(StatusProcessed)
|
|
`)
|
|
if err == nil && statusResult.String() != "undefined" {
|
|
s.Status = []byte(statusResult.String())
|
|
}
|
|
// extracting Subject
|
|
subjectResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, 'Observation.subject'))")
|
|
if err == nil && subjectResult.String() != "undefined" {
|
|
s.Subject = []byte(subjectResult.String())
|
|
}
|
|
// extracting Tag
|
|
tagResult, err := vm.RunString(`
|
|
TagResult = window.fhirpath.evaluate(fhirResource, 'Resource.meta.tag')
|
|
TagProcessed = TagResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(TagProcessed)
|
|
`)
|
|
if err == nil && tagResult.String() != "undefined" {
|
|
s.Tag = []byte(tagResult.String())
|
|
}
|
|
// extracting ValueConcept
|
|
valueConceptResult, err := vm.RunString(`
|
|
ValueConceptResult = window.fhirpath.evaluate(fhirResource, '(Observation.valueCodeableConcept)')
|
|
ValueConceptProcessed = ValueConceptResult.reduce((accumulator, currentValue) => {
|
|
if (currentValue.coding) {
|
|
//CodeableConcept
|
|
currentValue.coding.map((coding) => {
|
|
accumulator.push({
|
|
"code": coding.code,
|
|
"system": coding.system,
|
|
"text": currentValue.text
|
|
})
|
|
})
|
|
} else if (currentValue.value) {
|
|
//ContactPoint, Identifier
|
|
accumulator.push({
|
|
"code": currentValue.value,
|
|
"system": currentValue.system,
|
|
"text": currentValue.type?.text
|
|
})
|
|
} else if (currentValue.code) {
|
|
//Coding
|
|
accumulator.push({
|
|
"code": currentValue.code,
|
|
"system": currentValue.system,
|
|
"text": currentValue.display
|
|
})
|
|
} else if ((typeof currentValue === 'string') || (typeof currentValue === 'boolean')) {
|
|
//string, boolean
|
|
accumulator.push({
|
|
"code": currentValue,
|
|
})
|
|
}
|
|
return accumulator
|
|
}, [])
|
|
|
|
|
|
JSON.stringify(ValueConceptProcessed)
|
|
`)
|
|
if err == nil && valueConceptResult.String() != "undefined" {
|
|
s.ValueConcept = []byte(valueConceptResult.String())
|
|
}
|
|
// extracting ValueDate
|
|
valueDateResult, err := vm.RunString("window.fhirpath.evaluate(fhirResource, '(Observation.valueDateTime) | (Observation.valuePeriod)')[0]")
|
|
if err == nil && valueDateResult.String() != "undefined" {
|
|
t, err := time.Parse(time.RFC3339, valueDateResult.String())
|
|
if err == nil {
|
|
s.ValueDate = t
|
|
}
|
|
}
|
|
// extracting ValueQuantity
|
|
valueQuantityResult, err := vm.RunString("JSON.stringify(window.fhirpath.evaluate(fhirResource, '(Observation.valueQuantity) | (Observation.valueSampledData)'))")
|
|
if err == nil && valueQuantityResult.String() != "undefined" {
|
|
s.ValueQuantity = []byte(valueQuantityResult.String())
|
|
}
|
|
// extracting ValueString
|
|
valueStringResult, err := vm.RunString("window.fhirpath.evaluate(fhirResource, '(Observation.valueString) | (Observation.valueCodeableConcept).text')[0]")
|
|
if err == nil && valueStringResult.String() != "undefined" {
|
|
s.ValueString = valueStringResult.String()
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// TableName overrides the table name from fhir_observations (pluralized) to `fhir_observation`. https://gorm.io/docs/conventions.html#TableName
|
|
func (s *FhirObservation) TableName() string {
|
|
return "fhir_observation"
|
|
}
|