325 lines
16 KiB
Go
325 lines
16 KiB
Go
// THIS FILE IS GENERATED BY https://github.com/fastenhealth/fasten-onprem/blob/main/backend/pkg/models/database/generate.go
|
|
// PLEASE DO NOT EDIT BY HAND
|
|
|
|
package database
|
|
|
|
import (
|
|
"encoding/json"
|
|
"fmt"
|
|
goja "github.com/dop251/goja"
|
|
models "github.com/fastenhealth/fasten-onprem/backend/pkg/models"
|
|
datatypes "gorm.io/datatypes"
|
|
"time"
|
|
)
|
|
|
|
type FhirImagingStudy struct {
|
|
models.ResourceBase
|
|
// The order for the image
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
Basedon datatypes.JSON `gorm:"column:basedon;type:text;serializer:json" json:"basedon,omitempty"`
|
|
// The body site studied
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Bodysite datatypes.JSON `gorm:"column:bodysite;type:text;serializer:json" json:"bodysite,omitempty"`
|
|
// The type of the instance
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
DicomClass datatypes.JSON `gorm:"column:dicomClass;type:text;serializer:json" json:"dicomClass,omitempty"`
|
|
// The context of the study
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
Encounter datatypes.JSON `gorm:"column:encounter;type:text;serializer:json" json:"encounter,omitempty"`
|
|
// The endpoint for the study or series
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
Endpoint datatypes.JSON `gorm:"column:endpoint;type:text;serializer:json" json:"endpoint,omitempty"`
|
|
/*
|
|
Multiple Resources:
|
|
|
|
* [AllergyIntolerance](allergyintolerance.html): External ids for this item
|
|
* [CarePlan](careplan.html): External Ids for this plan
|
|
* [CareTeam](careteam.html): External Ids for this team
|
|
* [Composition](composition.html): Version-independent identifier for the Composition
|
|
* [Condition](condition.html): A unique identifier of the condition record
|
|
* [Consent](consent.html): Identifier for this record (external references)
|
|
* [DetectedIssue](detectedissue.html): Unique id for the detected issue
|
|
* [DeviceRequest](devicerequest.html): Business identifier for request/order
|
|
* [DiagnosticReport](diagnosticreport.html): An identifier for the report
|
|
* [DocumentManifest](documentmanifest.html): Unique Identifier for the set of documents
|
|
* [DocumentReference](documentreference.html): Master Version Specific Identifier
|
|
* [Encounter](encounter.html): Identifier(s) by which this encounter is known
|
|
* [EpisodeOfCare](episodeofcare.html): Business Identifier(s) relevant for this EpisodeOfCare
|
|
* [FamilyMemberHistory](familymemberhistory.html): A search by a record identifier
|
|
* [Goal](goal.html): External Ids for this goal
|
|
* [ImagingStudy](imagingstudy.html): Identifiers for the Study, such as DICOM Study Instance UID and Accession number
|
|
* [Immunization](immunization.html): Business identifier
|
|
* [List](list.html): Business identifier
|
|
* [MedicationAdministration](medicationadministration.html): Return administrations with this external identifier
|
|
* [MedicationDispense](medicationdispense.html): Returns dispenses with this external identifier
|
|
* [MedicationRequest](medicationrequest.html): Return prescriptions with this external identifier
|
|
* [MedicationStatement](medicationstatement.html): Return statements with this external identifier
|
|
* [NutritionOrder](nutritionorder.html): Return nutrition orders with this external identifier
|
|
* [Observation](observation.html): The unique id for a particular observation
|
|
* [Procedure](procedure.html): A unique identifier for a procedure
|
|
* [RiskAssessment](riskassessment.html): Unique identifier for the assessment
|
|
* [ServiceRequest](servicerequest.html): Identifiers assigned to this order
|
|
* [SupplyDelivery](supplydelivery.html): External identifier
|
|
* [SupplyRequest](supplyrequest.html): Business Identifier for SupplyRequest
|
|
* [VisionPrescription](visionprescription.html): Return prescriptions with this external identifier
|
|
*/
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Identifier datatypes.JSON `gorm:"column:identifier;type:text;serializer:json" json:"identifier,omitempty"`
|
|
// SOP Instance UID for an instance
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Instance datatypes.JSON `gorm:"column:instance;type:text;serializer:json" json:"instance,omitempty"`
|
|
// Who interpreted the images
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
Interpreter datatypes.JSON `gorm:"column:interpreter;type:text;serializer:json" json:"interpreter,omitempty"`
|
|
// Language of the resource content
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Language datatypes.JSON `gorm:"column:language;type:text;serializer:json" json:"language,omitempty"`
|
|
// When the resource version last changed
|
|
// https://hl7.org/fhir/r4/search.html#date
|
|
MetaLastUpdated *time.Time `gorm:"column:metaLastUpdated;type:datetime" json:"metaLastUpdated,omitempty"`
|
|
// Profiles this resource claims to conform to
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
MetaProfile datatypes.JSON `gorm:"column:metaProfile;type:text;serializer:json" json:"metaProfile,omitempty"`
|
|
// Tags applied to this resource
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
MetaTag datatypes.JSON `gorm:"column:metaTag;type:text;serializer:json" json:"metaTag,omitempty"`
|
|
// Tags applied to this resource
|
|
// This is a primitive string literal (`keyword` type). It is not a recognized SearchParameter type from https://hl7.org/fhir/r4/search.html, it's Fasten Health-specific
|
|
MetaVersionId string `gorm:"column:metaVersionId;type:text" json:"metaVersionId,omitempty"`
|
|
// The modality of the series
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Modality datatypes.JSON `gorm:"column:modality;type:text;serializer:json" json:"modality,omitempty"`
|
|
// The person who performed the study
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
Performer datatypes.JSON `gorm:"column:performer;type:text;serializer:json" json:"performer,omitempty"`
|
|
// The reason for the study
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Reason datatypes.JSON `gorm:"column:reason;type:text;serializer:json" json:"reason,omitempty"`
|
|
// The referring physician
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
Referrer datatypes.JSON `gorm:"column:referrer;type:text;serializer:json" json:"referrer,omitempty"`
|
|
// DICOM Series Instance UID for a series
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Series datatypes.JSON `gorm:"column:series;type:text;serializer:json" json:"series,omitempty"`
|
|
// When the study was started
|
|
// https://hl7.org/fhir/r4/search.html#date
|
|
Started *time.Time `gorm:"column:started;type:datetime" json:"started,omitempty"`
|
|
// The status of the study
|
|
// https://hl7.org/fhir/r4/search.html#token
|
|
Status datatypes.JSON `gorm:"column:status;type:text;serializer:json" json:"status,omitempty"`
|
|
// Who the study is about
|
|
// https://hl7.org/fhir/r4/search.html#reference
|
|
Subject datatypes.JSON `gorm:"column:subject;type:text;serializer:json" json:"subject,omitempty"`
|
|
// Text search against the narrative
|
|
// This is a primitive string literal (`keyword` type). It is not a recognized SearchParameter type from https://hl7.org/fhir/r4/search.html, it's Fasten Health-specific
|
|
Text string `gorm:"column:text;type:text" json:"text,omitempty"`
|
|
// A resource type filter
|
|
// https://hl7.org/fhir/r4/search.html#special
|
|
Type datatypes.JSON `gorm:"column:type;type:text;serializer:json" json:"type,omitempty"`
|
|
}
|
|
|
|
func (s *FhirImagingStudy) GetSearchParameters() map[string]string {
|
|
searchParameters := map[string]string{
|
|
"basedon": "reference",
|
|
"bodysite": "token",
|
|
"dicomClass": "token",
|
|
"encounter": "reference",
|
|
"endpoint": "reference",
|
|
"id": "keyword",
|
|
"identifier": "token",
|
|
"instance": "token",
|
|
"interpreter": "reference",
|
|
"language": "token",
|
|
"metaLastUpdated": "date",
|
|
"metaProfile": "reference",
|
|
"metaTag": "token",
|
|
"metaVersionId": "keyword",
|
|
"modality": "token",
|
|
"performer": "reference",
|
|
"reason": "token",
|
|
"referrer": "reference",
|
|
"series": "token",
|
|
"sort_date": "date",
|
|
"source_id": "keyword",
|
|
"source_resource_id": "keyword",
|
|
"source_resource_type": "keyword",
|
|
"source_uri": "keyword",
|
|
"started": "date",
|
|
"status": "token",
|
|
"subject": "reference",
|
|
"text": "keyword",
|
|
"type": "special",
|
|
}
|
|
return searchParameters
|
|
}
|
|
func (s *FhirImagingStudy) PopulateAndExtractSearchParameters(resourceRaw json.RawMessage) error {
|
|
s.ResourceRaw = datatypes.JSON(resourceRaw)
|
|
// unmarshal the raw resource (bytes) into a map
|
|
var resourceRawMap map[string]interface{}
|
|
err := json.Unmarshal(resourceRaw, &resourceRawMap)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
if len(fhirPathJs) == 0 {
|
|
return fmt.Errorf("fhirPathJs script is empty")
|
|
}
|
|
vm := goja.New()
|
|
// setup the global window object
|
|
vm.Set("window", vm.NewObject())
|
|
// set the global FHIR Resource object
|
|
vm.Set("fhirResource", resourceRawMap)
|
|
// compile the fhirpath library
|
|
fhirPathJsProgram, err := goja.Compile("fhirpath.min.js", fhirPathJs, true)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
// compile the searchParametersExtractor library
|
|
searchParametersExtractorJsProgram, err := goja.Compile("searchParameterExtractor.js", searchParameterExtractorJs, true)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
// add the fhirpath library in the goja vm
|
|
_, err = vm.RunProgram(fhirPathJsProgram)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
// add the searchParametersExtractor library in the goja vm
|
|
_, err = vm.RunProgram(searchParametersExtractorJsProgram)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
// execute the fhirpath expression for each search parameter
|
|
// extracting Basedon
|
|
basedonResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'ImagingStudy.basedOn')")
|
|
if err == nil && basedonResult.String() != "undefined" {
|
|
s.Basedon = []byte(basedonResult.String())
|
|
}
|
|
// extracting Bodysite
|
|
bodysiteResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'ImagingStudy.series.bodySite')")
|
|
if err == nil && bodysiteResult.String() != "undefined" {
|
|
s.Bodysite = []byte(bodysiteResult.String())
|
|
}
|
|
// extracting DicomClass
|
|
dicomClassResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'ImagingStudy.series.instance.sopClass')")
|
|
if err == nil && dicomClassResult.String() != "undefined" {
|
|
s.DicomClass = []byte(dicomClassResult.String())
|
|
}
|
|
// extracting Encounter
|
|
encounterResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'ImagingStudy.encounter')")
|
|
if err == nil && encounterResult.String() != "undefined" {
|
|
s.Encounter = []byte(encounterResult.String())
|
|
}
|
|
// extracting Endpoint
|
|
endpointResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'ImagingStudy.endpoint | ImagingStudy.series.endpoint')")
|
|
if err == nil && endpointResult.String() != "undefined" {
|
|
s.Endpoint = []byte(endpointResult.String())
|
|
}
|
|
// extracting Identifier
|
|
identifierResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'AllergyIntolerance.identifier | CarePlan.identifier | CareTeam.identifier | Composition.identifier | Condition.identifier | Consent.identifier | DetectedIssue.identifier | DeviceRequest.identifier | DiagnosticReport.identifier | DocumentManifest.masterIdentifier | DocumentManifest.identifier | DocumentReference.masterIdentifier | DocumentReference.identifier | Encounter.identifier | EpisodeOfCare.identifier | FamilyMemberHistory.identifier | Goal.identifier | ImagingStudy.identifier | Immunization.identifier | List.identifier | MedicationAdministration.identifier | MedicationDispense.identifier | MedicationRequest.identifier | MedicationStatement.identifier | NutritionOrder.identifier | Observation.identifier | Procedure.identifier | RiskAssessment.identifier | ServiceRequest.identifier | SupplyDelivery.identifier | SupplyRequest.identifier | VisionPrescription.identifier')")
|
|
if err == nil && identifierResult.String() != "undefined" {
|
|
s.Identifier = []byte(identifierResult.String())
|
|
}
|
|
// extracting Instance
|
|
instanceResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'ImagingStudy.series.instance.uid')")
|
|
if err == nil && instanceResult.String() != "undefined" {
|
|
s.Instance = []byte(instanceResult.String())
|
|
}
|
|
// extracting Interpreter
|
|
interpreterResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'ImagingStudy.interpreter')")
|
|
if err == nil && interpreterResult.String() != "undefined" {
|
|
s.Interpreter = []byte(interpreterResult.String())
|
|
}
|
|
// extracting Language
|
|
languageResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'language')")
|
|
if err == nil && languageResult.String() != "undefined" {
|
|
s.Language = []byte(languageResult.String())
|
|
}
|
|
// extracting MetaLastUpdated
|
|
metaLastUpdatedResult, err := vm.RunString("extractDateSearchParameters(fhirResource, 'meta.lastUpdated')")
|
|
if err == nil && metaLastUpdatedResult.String() != "undefined" {
|
|
t, err := time.Parse(time.RFC3339, metaLastUpdatedResult.String())
|
|
if err == nil {
|
|
s.MetaLastUpdated = &t
|
|
} else if err != nil {
|
|
d, err := time.Parse("2006-01-02", metaLastUpdatedResult.String())
|
|
if err == nil {
|
|
s.MetaLastUpdated = &d
|
|
}
|
|
}
|
|
}
|
|
// extracting MetaProfile
|
|
metaProfileResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'meta.profile')")
|
|
if err == nil && metaProfileResult.String() != "undefined" {
|
|
s.MetaProfile = []byte(metaProfileResult.String())
|
|
}
|
|
// extracting MetaTag
|
|
metaTagResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'meta.tag')")
|
|
if err == nil && metaTagResult.String() != "undefined" {
|
|
s.MetaTag = []byte(metaTagResult.String())
|
|
}
|
|
// extracting MetaVersionId
|
|
metaVersionIdResult, err := vm.RunString("extractSimpleSearchParameters(fhirResource, 'meta.versionId')")
|
|
if err == nil && metaVersionIdResult.String() != "undefined" {
|
|
s.MetaVersionId = metaVersionIdResult.String()
|
|
}
|
|
// extracting Modality
|
|
modalityResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'ImagingStudy.series.modality')")
|
|
if err == nil && modalityResult.String() != "undefined" {
|
|
s.Modality = []byte(modalityResult.String())
|
|
}
|
|
// extracting Performer
|
|
performerResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'ImagingStudy.series.performer.actor')")
|
|
if err == nil && performerResult.String() != "undefined" {
|
|
s.Performer = []byte(performerResult.String())
|
|
}
|
|
// extracting Reason
|
|
reasonResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'ImagingStudy.reasonCode')")
|
|
if err == nil && reasonResult.String() != "undefined" {
|
|
s.Reason = []byte(reasonResult.String())
|
|
}
|
|
// extracting Referrer
|
|
referrerResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'ImagingStudy.referrer')")
|
|
if err == nil && referrerResult.String() != "undefined" {
|
|
s.Referrer = []byte(referrerResult.String())
|
|
}
|
|
// extracting Series
|
|
seriesResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'ImagingStudy.series.uid')")
|
|
if err == nil && seriesResult.String() != "undefined" {
|
|
s.Series = []byte(seriesResult.String())
|
|
}
|
|
// extracting Started
|
|
startedResult, err := vm.RunString("extractDateSearchParameters(fhirResource, 'ImagingStudy.started')")
|
|
if err == nil && startedResult.String() != "undefined" {
|
|
t, err := time.Parse(time.RFC3339, startedResult.String())
|
|
if err == nil {
|
|
s.Started = &t
|
|
} else if err != nil {
|
|
d, err := time.Parse("2006-01-02", startedResult.String())
|
|
if err == nil {
|
|
s.Started = &d
|
|
}
|
|
}
|
|
}
|
|
// extracting Status
|
|
statusResult, err := vm.RunString("extractTokenSearchParameters(fhirResource, 'ImagingStudy.status')")
|
|
if err == nil && statusResult.String() != "undefined" {
|
|
s.Status = []byte(statusResult.String())
|
|
}
|
|
// extracting Subject
|
|
subjectResult, err := vm.RunString("extractReferenceSearchParameters(fhirResource, 'ImagingStudy.subject')")
|
|
if err == nil && subjectResult.String() != "undefined" {
|
|
s.Subject = []byte(subjectResult.String())
|
|
}
|
|
// extracting Text
|
|
textResult, err := vm.RunString("extractSimpleSearchParameters(fhirResource, 'text')")
|
|
if err == nil && textResult.String() != "undefined" {
|
|
s.Text = textResult.String()
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// TableName overrides the table name from fhir_observations (pluralized) to `fhir_observation`. https://gorm.io/docs/conventions.html#TableName
|
|
func (s *FhirImagingStudy) TableName() string {
|
|
return "fhir_imaging_study"
|
|
}
|